RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 SOX2P48431 317 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 GP2P55259 537 aaKnown RBP4.38□□□□□ -1.71
LRIT3-201ENST00000327908 PRSS12P56730 875 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 SPOCK1Q08629 439 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 SRSF7Q16629 238 aaKnown RBP eCLIP4.38□□□□□ -1.71
LRIT3-201ENST00000327908 MST1LQ2TV78 715 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 AWAT2Q6E213 333 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 FAM58AQ8N1B3 248 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 JAGN1Q8N5M9 183 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 OR51T1Q8NGJ9 327 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 OR2AE1Q8NHA4 323 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 LRRC29Q8WV35 223 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 SLC7A6Q92536 515 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 SNX22Q96L94 193 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 NEDD4LQ96PU5 975 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 HS3ST6Q96QI5 342 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 OR14A2Q96R54 314 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 PDCD1LG2Q9BQ51 273 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 C1orf123Q9NWV4 160 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 OR5V1Q9UGF6 321 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 ZNF107Q9UII5 783 aaPredicted RBP4.38□□□□□ -1.71
LRIT3-201ENST00000327908 LAMP3Q9UQV4 416 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 A8MXK9 166 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 E9PI62 339 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 TMEM178BH3BS89 294 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 SIAH2O43255 324 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 NDUFB3O43676 98 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 NCR1O76036 304 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 PSKH1P11801 424 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 CCL2P13500 99 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 HNF1AP20823 631 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 CALRP27797 417 aaKnown RBP4.38□□□□□ -1.71
LRIT3-201ENST00000327908 CAV3P56539 151 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 BTG1P62324 171 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 SPATA46Q5T0L3 261 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 CLVS1Q8IUQ0 354 aaPredicted RBP4.38□□□□□ -1.71
LRIT3-201ENST00000327908 OR5AS1Q8N127 324 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 OSR2Q8N2R0 312 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 EMG1Q92979 244 aaKnown RBP4.38□□□□□ -1.71
LRIT3-201ENST00000327908 C1orf159Q96HA4 380 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 TM2D1Q9BX74 207 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 SCPEP1Q9HB40 452 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 NLKQ9UBE8 527 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 HSF4Q9ULV5 492 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 RAI1Q7Z5J4 1906 aaPredicted RBP4.38□□□□□ -1.71
LRIT3-201ENST00000327908 FAM230AA0A1W2PPH8 454 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 CCDC160A6NGH7 325 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 PRR32B1ATL7 298 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 PSMD9O00233 223 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 ENSAO43768 121 aaKnown RBP4.38□□□□□ -1.71
LRIT3-201ENST00000327908 IL13RA1P78552 427 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 HLXQ14774 488 aaPredicted RBP4.38□□□□□ -1.71
LRIT3-201ENST00000327908 CDSNQ15517 529 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 ACTBL2Q562R1 376 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 ESCO2Q56NI9 601 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 LRRTM1Q86UE6 522 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 RFLNBQ8N5W9 214 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 GCSAMQ8N6F7 178 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 OR51F2Q8NH61 342 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 C10orf105Q8TEF2 133 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 S100ZQ8WXG8 99 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 CREB3L1Q96BA8 519 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 ADAT3Q96EY9 351 aaPredicted RBP4.38□□□□□ -1.71
LRIT3-201ENST00000327908 SDSLQ96GA7 329 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 NRIP2Q9BQI9 281 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 CHCHD6Q9BRQ6 235 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 FUNDC2Q9BWH2 189 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 TMEM59Q9BXS4 323 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 TTTY10Q9BZA0 68 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 MMP27Q9H306 513 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 OR51B6Q9H340 312 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 HES4Q9HCC6 221 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 OR6C3Q9NZP0 311 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 AASSQ9UDR5 926 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 SPATA2Q9UM82 520 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 ING4Q9UNL4 249 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 POLR3KQ9Y2Y1 108 aaPredicted RBP4.38□□□□□ -1.71
LRIT3-201ENST00000327908 WIPI2Q9Y4P8 454 aa4.38□□□□□ -1.71
LRIT3-201ENST00000327908 IFITM5A6NNB3 132 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 SERPINE3A8MV23 424 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 MGST3O14880 152 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 APOA1P02647 267 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 CSN2P05814 226 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 CTXN2P0C2S0 81 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 PPIAL4GP0DN37 164 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 ACKR3P25106 362 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 HAAOP46952 286 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 POU3F4P49335 361 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 ART1P52961 327 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 RPS11P62280 158 aaKnown RBP eCLIP4.37□□□□□ -1.71
LRIT3-201ENST00000327908 FABP5Q01469 135 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 ZNF146Q15072 292 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 UBE2NLQ5JXB2 153 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 OR52W1Q6IF63 320 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 C11orf88Q6PI97 169 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 HAGHLQ6PII5 290 aaPredicted RBP4.37□□□□□ -1.71
LRIT3-201ENST00000327908 MOGAT3Q86VF5 341 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 LRRC28Q86X40 367 aaPredicted RBP4.37□□□□□ -1.71
LRIT3-201ENST00000327908 SCCPDHQ8NBX0 429 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 SOX7Q9BT81 388 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms