RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ZNF71Q9NQZ8 489 aaPredicted RBP7.34□□□□□ -1.23
VPS41-202ENST00000310301 UQCC1Q9NVA1 299 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 EIF1BO60739 113 aaKnown RBP7.34□□□□□ -1.24
VPS41-202ENST00000310301 SNCGO76070 127 aa7.34□□□□□ -1.24
VPS41-202ENST00000310301 ADH4P08319 380 aa7.34□□□□□ -1.24
VPS41-202ENST00000310301 ZGLP1P0C6A0 271 aa7.34□□□□□ -1.24
VPS41-202ENST00000310301 PTHLHP12272 177 aa7.34□□□□□ -1.24
VPS41-202ENST00000310301 MYF5P13349 255 aa7.34□□□□□ -1.24
VPS41-202ENST00000310301 GPR12P47775 334 aa7.34□□□□□ -1.24
VPS41-202ENST00000310301 PPOXP50336 477 aa7.34□□□□□ -1.24
VPS41-202ENST00000310301 TMEM267Q0VDI3 215 aaPredicted RBP7.34□□□□□ -1.24
VPS41-202ENST00000310301 FAM209BQ5JX69 171 aa7.34□□□□□ -1.24
VPS41-202ENST00000310301 LILRA3Q8N6C8 439 aaPredicted RBP7.34□□□□□ -1.24
VPS41-202ENST00000310301 RBM38Q9H0Z9 239 aaKnown RBP7.34□□□□□ -1.24
VPS41-202ENST00000310301 SLC5A6Q9Y289 635 aa7.34□□□□□ -1.24
VPS41-202ENST00000310301 R4GMQ9 66 aa7.34□□□□□ -1.24
VPS41-202ENST00000310301 CHRNA7P36544 502 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 LIM2P55344 173 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 TRMT12Q53H54 448 aaKnown RBP7.33□□□□□ -1.24
VPS41-202ENST00000310301 C19orf48Q6RUI8 117 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 UBE3DQ7Z6J8 389 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 OR5AS1Q8N127 324 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 CRIPAKQ8N1N5 446 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 CISD2Q8N5K1 135 aaKnown RBP7.33□□□□□ -1.24
VPS41-202ENST00000310301 LHFPL5Q8TAF8 219 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 ASB5Q8WWX0 329 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 SMIM12Q96EX1 92 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 SDF2Q99470 211 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 NDFIP1Q9BT67 221 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 KIAA1217Q5T5P2 1943 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 TMEM218A2RU14 115 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 NKX6-3A6NJ46 265 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 M0R1X1 148 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 SIRPB1O00241 398 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 SOX15O60248 233 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 CRYBB2P43320 205 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 HES1Q14469 280 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 FAM78BQ5VT40 261 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 TCTN3Q6NUS6 607 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 MYPOPQ86VE0 399 aaPredicted RBP7.33□□□□□ -1.24
VPS41-202ENST00000310301 ZNF573Q86YE8 665 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 GPR137Q96N19 417 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 FAM166BA8MTA8 275 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 COX7A2P2O60397 106 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 SELENOPP49908 381 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 OTPQ5XKR4 325 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 DOK1Q99704 481 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 PCOLCE2Q9UKZ9 415 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 PPM1DO15297 605 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 WNT11O96014 354 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 CRYBA1P05813 215 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 DAOP14920 347 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 RFC3P40938 356 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 PPIAP62937 165 aaKnown RBP7.33□□□□□ -1.24
VPS41-202ENST00000310301 TIAL1Q01085 375 aaKnown RBP eCLIP7.33□□□□□ -1.24
VPS41-202ENST00000310301 RPEL1Q2QD12 228 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 PTOV1Q86YD1 416 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 C17orf78Q8N4C9 275 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 MYEOVQ96EZ4 313 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 MARVELD1Q9BSK0 173 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 PBOV1Q9GZY1 135 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 P2RY12Q9H244 342 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 SLCO1C1Q9NYB5 712 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 URB1O60287 2271 aaKnown RBP7.33□□□□□ -1.24
VPS41-202ENST00000310301 LINC01387J3KSC0 135 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 NBL1P41271 181 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 HLA-DRB3P79483 266 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 AGERQ15109 404 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 ELFN2Q5R3F8 820 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 ZDHHC22Q8N966 263 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 RDH5Q92781 318 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 ADGRG7Q96K78 797 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 OR10C1Q96KK4 312 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 SNX22Q96L94 193 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 RTL8AQ9BWD3 113 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 LPAR3Q9UBY5 353 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 DUSP13Q9UII6 198 aa7.33□□□□□ -1.24
VPS41-202ENST00000310301 RALYQ9UKM9 306 aaKnown RBP7.33□□□□□ -1.24
VPS41-202ENST00000310301 MICAL3Q7RTP6 2002 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 HMSDA8MTL9 139 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 ZNF737O75373 536 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 CYC1P08574 325 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 RPL7P18124 248 aaKnown RBP7.32□□□□□ -1.24
VPS41-202ENST00000310301 ACP1P24666 158 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 TBC1D28Q2M2D7 210 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 FHL5Q5TD97 284 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 CT55Q8WUE5 264 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 SIGLEC11Q96RL6 698 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 MAP1BP46821 2468 aaKnown RBP7.32□□□□□ -1.24
VPS41-202ENST00000310301 HSPB2A8KAH6 182 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 SH2D1BO14796 132 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 FPR2P25090 351 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 FAM3AP98173 230 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 DHRS2Q13268 280 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 HSPB2Q16082 182 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 SP6Q3SY56 376 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 FFAR4Q5NUL3 377 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 TMEFF2Q9UIK5 374 aaPredicted RBP7.32□□□□□ -1.24
VPS41-202ENST00000310301 ASB1Q9Y576 335 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 TIMM9Q9Y5J7 89 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms