RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 HOGA1Q86XE5 327 aa9.09□□□□□ -0.95
APOBEC3F-201ENST00000308521 PRR18Q8N4B5 295 aa9.09□□□□□ -0.95
APOBEC3F-201ENST00000308521 PNLDC1Q8NA58 520 aaKnown RBP9.09□□□□□ -0.95
APOBEC3F-201ENST00000308521 OR4D6Q8NGJ1 314 aa9.09□□□□□ -0.95
APOBEC3F-201ENST00000308521 NUDCD2Q8WVJ2 157 aa9.09□□□□□ -0.95
APOBEC3F-201ENST00000308521 G6PC2Q9NQR9 355 aa9.09□□□□□ -0.95
APOBEC3F-201ENST00000308521 FBLN5Q9UBX5 448 aa9.09□□□□□ -0.95
APOBEC3F-201ENST00000308521 LPAR3Q9UBY5 353 aa9.09□□□□□ -0.95
APOBEC3F-201ENST00000308521 OR52A1Q9UKL2 312 aa9.09□□□□□ -0.95
APOBEC3F-201ENST00000308521 DOCK10Q96BY6 2186 aa9.09□□□□□ -0.95
APOBEC3F-201ENST00000308521 FREM3P0C091 2139 aa9.09□□□□□ -0.95
APOBEC3F-201ENST00000308521 TMED7-TICAM2A0A0A6YYA0 188 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 LOC107986453A0A1B0GWG9 222 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 H3BML4 177 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 TNFSF15O95150 251 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 CD5P06127 495 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 ACKR3P25106 362 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 HSD11B1P28845 292 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 F2RL1P55085 397 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 QRFPP83859 136 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 OR7A5Q15622 319 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 CDCP2Q5VXM1 449 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 OTPQ5XKR4 325 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 DCXRQ7Z4W1 244 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 PPP1R32Q7Z5V6 425 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 CASTOR1Q8WTX7 329 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 SMIM8Q96KF7 97 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 NDUFAF3Q9BU61 184 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 FRYQ5TBA9 3013 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 CEACAM18A8MTB9 384 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 DXOO77932 396 aaKnown RBP9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 IFNA6P05013 189 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 CTLA4P16410 223 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 AKR1C4P17516 323 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 HRH1P35367 487 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 PTGDSP41222 190 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 TNFRSF9Q07011 255 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 C17orf67Q0P5P2 114 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 Q0VFX4 171 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 PRSS54Q6PEW0 395 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 DEGS2Q6QHC5 323 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 GVQW1Q8N7I0 195 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 ZSCAN4Q8NAM6 433 aaPredicted RBP9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 PRSS33Q8NF86 280 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 TMED6Q8WW62 240 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 SPACA9Q96E40 222 aaPredicted RBP9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 RRNAD1Q96FB5 475 aaKnown RBP9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 AQP10Q96PS8 301 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 OR5B2Q96R09 309 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 ZNF700Q9H0M5 742 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 FN3KRPQ9HA64 309 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 RAB18Q9NP72 206 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 ANAPC10Q9UM13 185 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 C13orf42A0A1B0GVH6 325 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 RNASEK-C17orf49H0YIS7 233 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 H0YIZ8 118 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 SFTA3P0C7M3 94 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 MSX1P28360 303 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 GABREP78334 506 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 RHEBQ15382 184 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 TMEM128Q5BJH2 165 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 MDGA2Q7Z553 956 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 MRPL52Q86TS9 123 aaKnown RBP9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 ADAMTS17Q8TE56 1095 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 WNT2BQ93097 391 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 JSRP1Q96MG2 331 aaPredicted RBP9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 FOXN4Q96NZ1 517 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 CNTD2Q9H8S5 307 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 RHOFQ9HBH0 211 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 DNAJB11Q9UBS4 358 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 CACFD1Q9UGQ2 172 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 WASF3Q9UPY6 502 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 EMC9Q9Y3B6 208 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 WIF1Q9Y5W5 379 aa9.08□□□□□ -0.96
APOBEC3F-201ENST00000308521 EXPH5Q8NEV8 1989 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 LOC100509620A0A075B734 347 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 ZNF705EA8MWA4 302 aaPredicted RBP9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 PRR33A8MZF0 331 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 MED6O75586 246 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 F12P00748 615 aaPredicted RBP9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 GLO1Q04760 184 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 UNC119Q13432 240 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 RSU1Q15404 277 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 PCK2Q16822 640 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 ACTBL2Q562R1 376 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 TMEM164Q5U3C3 297 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 EIF5AL1Q6IS14 154 aaKnown RBP9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 SPNS3Q6ZMD2 512 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 PEG10Q86TG7 708 aaKnown RBP9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 RPS19BP1Q86WX3 136 aaKnown RBP9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 TMEM156Q8N614 296 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 UBAC2Q8NBM4 344 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 CHST4Q8NCG5 386 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 SPRY4Q9C004 299 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 PCDHGA1Q9Y5H4 931 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 SPENQ96T58 3664 aaKnown RBP9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 AKAP13Q12802 2813 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 CCDC187A0A096LP49 1063 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 KCNAB3O43448 404 aa9.07□□□□□ -0.96
APOBEC3F-201ENST00000308521 EFNA2O43921 213 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms