RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 H2-M2Q6W9L1 343 aa13.99□□□□□ -0.17
Trim39-203ENSMUST00000113706 Slc22a20Q80UJ1 556 aa13.99□□□□□ -0.17
Trim39-203ENSMUST00000113706 1700020A23RikQ9DA59 131 aa13.99□□□□□ -0.17
Trim39-203ENSMUST00000113706 Zfhx4Q9JJN2 3550 aa13.99□□□□□ -0.17
Trim39-203ENSMUST00000113706 Cfap46E9Q2C0 2641 aa13.99□□□□□ -0.17
Trim39-203ENSMUST00000113706 Zfp820E9Q5G8 549 aa13.99□□□□□ -0.17
Trim39-203ENSMUST00000113706 Irf1P15314 329 aa13.99□□□□□ -0.17
Trim39-203ENSMUST00000113706 Rag2P21784 527 aa13.99□□□□□ -0.17
Trim39-203ENSMUST00000113706 Nr2f6P43136 390 aa13.99□□□□□ -0.17
Trim39-203ENSMUST00000113706 SryQ05738 395 aa13.99□□□□□ -0.17
Trim39-203ENSMUST00000113706 Rbm38Q62176 237 aaKnown RBP13.99□□□□□ -0.17
Trim39-203ENSMUST00000113706 Cdkl3Q8BLF2 595 aa13.99□□□□□ -0.17
Trim39-203ENSMUST00000113706 Chrnb4Q8R493 495 aa13.99□□□□□ -0.17
Trim39-203ENSMUST00000113706 Cryzl1Q921W4 348 aa13.99□□□□□ -0.17
Trim39-203ENSMUST00000113706 OxsmQ9D404 459 aa13.99□□□□□ -0.17
Trim39-203ENSMUST00000113706 Gpx2Q9JHC0 190 aa13.99□□□□□ -0.17
Trim39-203ENSMUST00000113706 Psma6Q9QUM9 246 aa13.99□□□□□ -0.17
Trim39-203ENSMUST00000113706 Olfr1066A2AK62 313 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Ankrd60A2AMD2 318 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 P2rx6O54803 389 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Ca10P61215 328 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 TsxP70675 144 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Parp16Q7TMM8 322 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Cnppd1Q8K158 407 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Kiaa0513Q8R0A7 407 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Olfr1110Q8VG38 312 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Ddb2Q99J79 432 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Cmtm2aQ9DAR1 169 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 C1galt1Q9JJ06 363 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Tnfrsf19Q9JLL3 416 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Ca14Q9WVT6 337 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Gm38303A0A0A6YWW8 100 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Gm4881A0A140LIR9 352 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Slc18b1D3Z5L6 459 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Wisp3D3Z5L9 354 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 BC035044E0CXF8 138 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Gm21797J3QNW5 180 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 PilraQ2YFS3 302 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Olfr1061Q7TR72 313 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 MetrnlQ8VE43 311 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Emc3Q99KI3 261 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Ctag2Q9D9S4 219 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Gm2022A0A1Y7VLT7 144 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Gm20683H3BKJ1 410 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Gm2075J3QMW5 144 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Zfp2P08043 459 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Taf13P61216 124 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 BB287469Q3UT53 144 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 SprQ64105 261 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Alkbh2Q6P6J4 239 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Inca1Q6PKN7 231 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Olfr1106Q7TR57 312 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Prss34Q80UR4 318 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Slc38a1Q8K2P7 485 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Olfr446Q8VEV0 308 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Olfr1447Q8VFX3 309 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Sf3b5Q923D4 86 aaKnown RBP13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Dusp3Q9D7X3 185 aa13.98□□□□□ -0.17
Trim39-203ENSMUST00000113706 Cacna1aP97445 2368 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Olfr1130A0A1L1SQT2 314 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Olfr1129A2AV41 314 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Ccdc9bA3KGF9 545 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Il7rP16872 459 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 XylbQ3TNA1 551 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Scml4Q80VG1 408 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Slc25a44Q8BGF9 314 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Ldlrad4Q8BWJ4 306 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Tctn3Q8R2Q6 595 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Mrgpra6Q91ZC6 301 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Acp1Q9D358 158 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Bap18Q9DCT6 171 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Znf319Q9ERR8 581 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Mrpl39Q9JKF7 336 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Vps13cQ8BX70 3748 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Tmem156A0A1D5RLR8 321 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Xlr4aA2BI40 215 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Gm15737D3YZR0 106 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Foxl2O88470 375 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 PvalbP32848 110 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Ccdc190Q3URK1 288 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Cggbp1Q8BHG9 167 aaKnown RBP13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Sulf2Q8CFG0 875 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Olfr434Q8VF17 321 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Olfr1443Q8VFW8 312 aa13.97□□□□□ -0.17
Trim39-203ENSMUST00000113706 Gm20219A0A1B0GRQ3 87 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 Gm14409A2ARR8 349 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 Gm20834J3QM72 227 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 P20040 264 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 GdnfP48540 211 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 Lsm6P62313 80 aaKnown RBP13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 SrmQ64674 302 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 B430306N03RikQ6QX36 289 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 9930022D16RikQ8BG27 128 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 Agpat2Q8K3K7 278 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 Vmn1r193Q8R258 319 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 Klhl25Q8R2P1 589 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 AspdhQ9DCQ2 287 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 Capn1O35350 713 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 Spi1P17433 272 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 Dok1P97465 482 aa13.96□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms