RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Gtf2f2Q8R0A0 249 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Olfr1044Q8VGR9 314 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 MrgprgQ91ZB5 289 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 PpifQ99KR7 206 aaKnown RBP16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Lhx6Q9R1R0 363 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 PtprbB2RU80 1998 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Col4a4Q9QZR9 1682 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 mt-Co3P00416 261 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Il4P07750 140 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Fv1P70213 459 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Smn1P97801 288 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Dhrs9Q58NB6 319 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Hsf5Q5ND04 624 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Selenbp2Q63836 472 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 CelQ64285 599 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Olfr259Q7TS20 312 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Lrfn4Q80XU8 636 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Negr1Q80Z24 348 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Wdr48Q8BH57 676 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Klhl24Q8BRG6 600 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Chrdl2Q8VEA6 426 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Atg5Q99J83 275 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Q9CWB7 115 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Ogfod3Q9D136 315 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Izumo1Q9D9J7 397 aa16.65■□□□□ 0.26
Shkbp1-201ENSMUST00000003857 Igkv4-63A0A0G2JFU6 117 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Ggta1l1A2AUQ7 319 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Prr23a1G3UW32 258 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Phb2O35129 299 aaKnown RBP16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Gpld1O70362 837 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 P01638 115 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 HckP08103 524 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Zfp27P10077 819 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Cldn18P56857 264 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Gpr85P60894 370 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Tmem231Q3U284 315 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Sim2Q61079 657 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 ArhgdibQ61599 200 aaKnown RBP16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Mrpl22Q8BU88 206 aaKnown RBP16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Acp7Q8BX37 438 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 RydenQ8CAK3 290 aaKnown RBP16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Dusp18Q8VE01 188 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Olfr1038Q8VGS1 319 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 9530002B09RikQ9EPV7 135 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 SncgQ9Z0F7 123 aaKnown RBP16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Arid1aA2BH40 2283 aaKnown RBP16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Ralgapa1Q6GYP7 2035 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 A0A1L1SV24 88 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Ccdc9bA3KGF9 545 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Bet1O35623 118 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Hist1h1cP15864 212 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Hoxd12P23812 268 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 LtbP41155 306 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Olfr733Q14AK5 308 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Pon3Q62087 354 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 LaynQ8C351 381 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Pias2Q8C5D8 621 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 BivmQ8CBX9 502 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 SdhdQ9CXV1 159 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 FcrlsQ9EQY5 509 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 HrgQ9ESB3 525 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Serinc1Q9QZI8 453 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Bcl3Q9Z2F6 448 aa16.64■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Gm5798F7BTS7 198 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Zfp955bL7N232 545 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Csf1P07141 552 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Adrb2P18762 418 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Rab3aP63011 220 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 RelbQ04863 558 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Olfr5Q60889 312 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Clns1aQ61189 236 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Pcp4l1Q6W8Q3 68 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Olfr1212Q7TR08 311 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Olfr1211Q7TR09 311 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Slc30a6Q8BJM5 460 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 SdhaQ8K2B3 664 aaKnown RBP16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Sla2Q8R4L0 259 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 D1Ertd622eQ8VEB3 207 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Cryzl1Q921W4 348 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Acy1Q99JW2 408 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Arpc5Q9CPW4 151 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Fxyd6Q9D164 94 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Irak1bp1Q9ESJ7 259 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Fer1l4A3KGK3 1992 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Olfr685A0A1L1SVG7 331 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 E030025P04RikA2A6V5 185 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Raet1aO08602 253 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Raet1bO08603 253 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Prrt1O35449 306 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Has2P70312 552 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Masp1P98064 704 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Lgals3bpQ07797 577 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Rasl12Q08AT1 266 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Fbxw22Q5XG67 466 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Slc17a1Q61983 465 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 CmblQ8R1G2 245 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Olfr930Q9EQ99 308 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Ccnl2Q9JJA7 518 aa16.63■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 RttnQ8R4Y8 2226 aa16.62■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 DmdP11531 3678 aa16.62■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 34.1 ms