RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 IFT88Q13099 833 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ERCC8Q13216 396 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ILKQ13418 452 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 XRCC4Q13426 336 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 PIGHQ14442 188 aaPredicted RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 GNMTQ14749 295 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ELOCQ15369 112 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 SYCP1Q15431 976 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 LY6EQ16553 131 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 SGCAQ16586 387 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 FAM83EQ2M2I3 478 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 RSPO1Q2MKA7 263 aaPredicted RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 KLHL38Q2WGJ6 581 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 C18orf21Q32NC0 220 aaPredicted RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 TTLL9Q3SXZ7 439 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ABCA11PQ4W5N1 156 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 PYCR3Q53H96 274 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 C5orf47Q569G3 176 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 CFAP157Q5JU67 520 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 PDZK1Q5T2W1 519 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 HENMT1Q5T8I9 393 aaKnown RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ATAD3BQ5T9A4 648 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 OR4F3Q6IEY1 312 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 C1orf94Q6P1W5 598 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 WDR59Q6PJI9 974 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 UQCC3Q6UW78 93 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 DGAT2L6Q6ZPD8 337 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ABHD13Q7L211 337 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 STRADAQ7RTN6 431 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 OLIG3Q7RTU3 272 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 GLT6D1Q7Z4J2 308 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 HMGN2P46Q86SG4 172 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 DHDDSQ86SQ9 333 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 OOSP2Q86WS3 158 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 RAB43Q86YS6 212 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 VSTM4Q8IW00 320 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 RIMKLAQ8IXN7 391 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 C12orf56Q8IXR9 622 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 IQCKQ8N0W5 287 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 PUSL1Q8N0Z8 303 aaKnown RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 LGI3Q8N145 548 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ZADH2Q8N4Q0 377 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ARRDC1Q8N5I2 433 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 OTUD6BQ8N6M0 293 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 PQLC3Q8N755 202 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 FAM86B1Q8N7N1 296 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF615Q8N8J6 731 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 MFSD9Q8NBP5 474 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ACBD4Q8NC06 268 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 OR5M1Q8NGP8 315 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 UBALD1Q8TB05 177 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 LINC01560Q8TB33 94 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 MAGEE2Q8TD90 523 aaPredicted RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 PHF10Q8WUB8 498 aaKnown RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF606Q8WXB4 792 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 SHC3Q92529 594 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 FAM3DQ96BQ1 224 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ECHDC3Q96DC8 303 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 TM4SF19Q96DZ7 209 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 DTNBP1Q96EV8 351 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 AURKBQ96GD4 344 aaPredicted RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 COX14Q96I36 57 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF514Q96K75 400 aaPredicted RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 BTN2A3PQ96KV6 586 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 C9orf72Q96LT7 481 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 CSPG4P5Q96PW8 444 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 SLC38A2Q96QD8 506 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 PANX2Q96RD6 677 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 SORT1Q99523 831 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 SPIN2AQ99865 258 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 RARRES2Q99969 163 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 SPIN2BQ9BPZ2 258 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 LLPHQ9BRT6 129 aaKnown RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF2Q9BSG1 426 aaPredicted RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ZSCAN5AQ9BUG6 496 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 TIPINQ9BVW5 301 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 DDA1Q9BW61 102 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 SCRT1Q9BWW7 348 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 OSBPL10Q9BXB5 764 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 CAPS2Q9BXY5 557 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 SLC7A5P2Q9GIP4 190 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 AICDAQ9GZX7 198 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ING2Q9H160 280 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 DEFB127Q9H1M4 99 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 PPA2Q9H2U2 334 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 RANBP3Q9H6Z4 567 aaPredicted RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 LRRC19Q9H756 370 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 RMND5AQ9H871 391 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF430Q9H8G1 570 aaPredicted RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ANKRA2Q9H9E1 313 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 UGT1A7Q9HAW7 530 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 UGT1A10Q9HAW8 530 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 UGT1A8Q9HAW9 530 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 NOX3Q9HBY0 568 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 SLC40A1Q9NP59 571 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 KCNJ16Q9NPI9 418 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 SIRT7Q9NRC8 400 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 CTPS2Q9NRF8 586 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 UFSP2Q9NUQ7 469 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 EXD2Q9NVH0 621 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms