RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 GIMAP1Q8WWP7 306 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 ACOT12Q8WYK0 555 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 HAVCR1Q96D42 359 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 RAB3CQ96E17 227 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 A0A0A6YYJ9 748 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 SRSF10O75494 262 aaKnown RBP9.1□□□□□ -0.95
VPS11-208ENST00000621676 CYB5AP00167 134 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 IGF2P01344 180 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 SERPINA5P05154 406 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 CCR9P51686 369 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 SEC61A1P61619 476 aaKnown RBP9.1□□□□□ -0.95
VPS11-208ENST00000621676 TBR1Q16650 682 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 Q5BKY6 102 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 BEX5Q5H9J7 111 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 PRAMEF6Q5VXH4 476 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 DOK3Q7L591 496 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 ARMC10Q8N2F6 343 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 SLC25A40Q8TBP6 338 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 ZDHHC11Q9H8X9 412 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 PAIP2BQ9ULR5 123 aaKnown RBP9.1□□□□□ -0.95
VPS11-208ENST00000621676 MALRD1Q5VYJ5 2156 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 CELSR2Q9HCU4 2923 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 METTL21EPA6NDL7 271 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 WIPF3A6NGB9 483 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 WNT9BO14905 357 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 BET1O15155 118 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 SPRY3O43610 288 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 RAB3DO95716 219 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 ZNF44P15621 663 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 LSM6P62312 80 aaKnown RBP9.1□□□□□ -0.95
VPS11-208ENST00000621676 MPPED2Q15777 294 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 SEM1Q6ZVN7 128 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 OR4K15Q8NH41 348 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 S100PBPQ96BU1 408 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 HIST1H2AAQ96QV6 131 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 CCDC32Q9BV29 185 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 DKK4Q9UBT3 224 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 ST3GAL6Q9Y274 331 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 KCNK7Q9Y2U2 307 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 VPS13CQ709C8 3753 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 ARHGAP21Q5T5U3 1957 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 A0A0A6YYD4 124 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 F5H5P2 479 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 IFNA6P05013 189 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 MPV17P39210 176 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 RTP5Q14D33 572 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 RAB35Q15286 201 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 SF3B4Q15427 424 aaKnown RBP eCLIP9.09□□□□□ -0.95
VPS11-208ENST00000621676 PLAC9Q5JTB6 97 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 IDO2Q6ZQW0 420 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 OSGIN2Q9Y236 505 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 C13orf42A0A1B0GVH6 325 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 MTRF1O75570 445 aaKnown RBP9.09□□□□□ -0.95
VPS11-208ENST00000621676 PRB1P04280 392 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 NR2C1P13056 603 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 PRDX4Q13162 271 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 ADAM5Q6NVV9 412 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 ADGRE4PQ86SQ3 457 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 OR6M1Q8NGM8 313 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 TRIM63Q969Q1 353 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 FBXO9Q9UK97 447 aaPredicted RBP9.09□□□□□ -0.95
VPS11-208ENST00000621676 PROCRQ9UNN8 238 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 ACANP16112 2415 aa9.09□□□□□ -0.95
VPS11-208ENST00000621676 DOCK11Q5JSL3 2073 aa9.09□□□□□ -0.96
VPS11-208ENST00000621676 IGKV1D-8A0A087WSZ0 117 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 IGKV1-12A0A0C4DH73 117 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 SIRPB1O00241 398 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 ACTL6AO96019 429 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 IGKV1D-12P01611 117 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 NFYAP23511 347 aaPredicted RBP9.08□□□□□ -0.96
VPS11-208ENST00000621676 FKBP2P26885 142 aaKnown RBP9.08□□□□□ -0.96
VPS11-208ENST00000621676 TMEM50BP56557 158 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 TGFBR3Q03167 851 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 MALLQ13021 153 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 SLC9A3R2Q15599 337 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 ACSF3Q4G176 576 aaPredicted RBP9.08□□□□□ -0.96
VPS11-208ENST00000621676 C10orf128Q5T292 105 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 TGIF2LYQ8IUE0 185 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 LINC01560Q8TB33 94 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 OIT3Q8WWZ8 545 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 RNF122Q9H9V4 155 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 NAV3Q8IVL0 2385 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 NAV2Q8IVL1 2488 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 NKX2-6A6NCS4 301 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 CD300LBA8K4G0 201 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 RAB27BO00194 218 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 MMP7P09237 267 aaPredicted RBP9.08□□□□□ -0.96
VPS11-208ENST00000621676 H2AFB2P0C5Z0 115 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 CD82P27701 267 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 OR3A3P47888 321 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 OR3A2P47893 321 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 IKZF1Q13422 519 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 LIX1LQ8IVB5 337 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 CSNK2A3Q8NEV1 391 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 RFESDQ8TAC1 157 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 SCMH1Q96GD3 660 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 MED28Q9H204 178 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 DPAGT1Q9H3H5 408 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 MED19A0JLT2 244 aaPredicted RBP9.08□□□□□ -0.96
VPS11-208ENST00000621676 ZNF736B4DX44 427 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms