RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 YIPF5Q969M3 257 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 C14orf79Q96F83 325 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 PLEKHB1Q9UF11 243 aaPredicted RBP12.28□□□□□ -0.44
CIITA-213ENST00000618327 DOCK8Q8NF50 2099 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 LOC101059948A0A1B0GTJ6 334 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 PRR19A6NJB7 356 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 GLSO94925 669 aaPredicted RBP12.28□□□□□ -0.44
CIITA-213ENST00000618327 GSTP1P09211 210 aaKnown RBP12.28□□□□□ -0.44
CIITA-213ENST00000618327 ANXA7P20073 488 aaKnown RBP12.28□□□□□ -0.44
CIITA-213ENST00000618327 KITLGP21583 273 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 FLI1Q01543 452 aaPredicted RBP12.28□□□□□ -0.44
CIITA-213ENST00000618327 AADACL3Q5VUY0 350 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 RNF133Q8WVZ7 376 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 CEBPZOSA8MTT3 80 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 CD3DP04234 171 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 ECI1P42126 302 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 MFGE8Q08431 387 aaPredicted RBP12.28□□□□□ -0.44
CIITA-213ENST00000618327 MSMO1Q15800 293 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 IAH1Q2TAA2 248 aaPredicted RBP12.28□□□□□ -0.44
CIITA-213ENST00000618327 ARSJQ5FYB0 599 aaPredicted RBP12.28□□□□□ -0.44
CIITA-213ENST00000618327 RGS7BPQ6MZT1 257 aaPredicted RBP12.28□□□□□ -0.44
CIITA-213ENST00000618327 FAAP20Q6NZ36 180 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 MRPL14Q6P1L8 145 aaKnown RBP12.28□□□□□ -0.44
CIITA-213ENST00000618327 ADPRHL1Q8NDY3 354 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 THY1P04216 161 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 CST2P09228 141 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 DCTDP32321 178 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 OPRM1P35372 400 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 OSR2Q8N2R0 312 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 HGDQ93099 445 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 KIRREL1Q96J84 757 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.28□□□□□ -0.44
CIITA-213ENST00000618327 OR5V1Q9UGF6 321 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 SH2D1BO14796 132 aa12.27□□□□□ -0.44
CIITA-213ENST00000618327 TMIGD3P0DMS9 266 aaPredicted RBP12.27□□□□□ -0.44
CIITA-213ENST00000618327 CCL2P13500 99 aa12.27□□□□□ -0.44
CIITA-213ENST00000618327 CATR1Q13166 79 aa12.27□□□□□ -0.44
CIITA-213ENST00000618327 GPR35Q9HC97 309 aa12.27□□□□□ -0.44
CIITA-213ENST00000618327 RNF212BA8MTL3 300 aa12.27□□□□□ -0.45
CIITA-213ENST00000618327 GLRA1P23415 457 aa12.27□□□□□ -0.45
CIITA-213ENST00000618327 GPM6AP51674 278 aa12.27□□□□□ -0.45
CIITA-213ENST00000618327 POFUT1Q9H488 388 aa12.27□□□□□ -0.45
CIITA-213ENST00000618327 SLC17A5Q9NRA2 495 aa12.27□□□□□ -0.45
CIITA-213ENST00000618327 TTC28Q96AY4 2481 aa12.27□□□□□ -0.45
CIITA-213ENST00000618327 DCTN6O00399 190 aa12.27□□□□□ -0.45
CIITA-213ENST00000618327 OR52W1Q6IF63 320 aa12.27□□□□□ -0.45
CIITA-213ENST00000618327 C17orf107Q6ZR85 190 aa12.27□□□□□ -0.45
CIITA-213ENST00000618327 TMUB2Q71RG4 321 aa12.27□□□□□ -0.45
CIITA-213ENST00000618327 CATSPERDQ86XM0 798 aa12.27□□□□□ -0.45
CIITA-213ENST00000618327 MFSD4AQ8N468 514 aa12.27□□□□□ -0.45
CIITA-213ENST00000618327 BOD1Q96IK1 185 aa12.27□□□□□ -0.45
CIITA-213ENST00000618327 C20orf202A1L168 122 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 FAM221AA4D161 298 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 SPINT2O43291 252 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 GABRA4P48169 554 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 OR2T2Q6IF00 324 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 UPRTQ96BW1 309 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 NKX6-2Q9C056 277 aaPredicted RBP12.26□□□□□ -0.45
CIITA-213ENST00000618327 GPR27Q9NS67 375 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 SLC39A9Q9NUM3 307 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 ZNF629Q9UEG4 869 aaPredicted RBP12.26□□□□□ -0.45
CIITA-213ENST00000618327 NKX6-3A6NJ46 265 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 TAGLN2P37802 199 aaKnown RBP12.26□□□□□ -0.45
CIITA-213ENST00000618327 ZNF610Q8N9Z0 462 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 OR52N4Q8NGI2 321 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 PLK3Q9H4B4 646 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 SIRPB1O00241 398 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 CLN5O75503 358 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 B3GALNT1O75752 331 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 GZMKP49863 264 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 SCAND1P57086 179 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 AKR1C1Q04828 323 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 ZFP36L1Q07352 338 aaKnown RBP12.26□□□□□ -0.45
CIITA-213ENST00000618327 ZNF266Q14584 549 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 CDCP2Q5VXM1 449 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 MITD1Q8WV92 249 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 DAZAP1Q96EP5 407 aaKnown RBP12.26□□□□□ -0.45
CIITA-213ENST00000618327 TMEM38BQ9NVV0 291 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 LSM2Q9Y333 95 aaKnown RBP12.26□□□□□ -0.45
CIITA-213ENST00000618327 SDCBPO00560 298 aaPredicted RBP12.26□□□□□ -0.45
CIITA-213ENST00000618327 PTGFRP43088 359 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 RFX2P48378 723 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 GNG3P63215 75 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 EGR4Q05215 589 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 CDC20Q12834 499 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 CLINT1Q14677 625 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 SFRP5Q5T4F7 317 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 ATP1A1-AS1Q5TC04 95 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 KLHDC2Q9Y2U9 406 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 KPTNQ9Y664 436 aa12.26□□□□□ -0.45
CIITA-213ENST00000618327 C19orf67A6NJJ6 358 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 ADRB1P08588 477 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 MMP16P51512 607 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 ZNF83P51522 516 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 GUCA2AQ02747 115 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 SSBP1Q04837 148 aaKnown RBP12.25□□□□□ -0.45
CIITA-213ENST00000618327 PHLDA2Q53GA4 152 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 TMEM91Q6ZNR0 172 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 FBXL14Q8N1E6 418 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 URGCP-MRPS24S4R325 110 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms