RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 MFSD2BA6NFX1 497 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 TTLL8A6PVC2 850 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 NUDT19A8MXV4 375 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 H3BMH7 237 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 EFSO43281 561 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 LSM6P62312 80 aaKnown RBP7.66□□□□□ -1.18
LIG4-204ENST00000611712 PPIAP62937 165 aaKnown RBP7.66□□□□□ -1.18
LIG4-204ENST00000611712 IL11RAQ14626 422 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 UQCC3Q6UW78 93 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 LHFPL2Q6ZUX7 228 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 TMEM217Q8N7C4 229 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 CCDC54Q8NEL0 328 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 AQP3Q92482 292 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 NINJ1Q92982 152 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 FBXW5Q969U6 566 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 FOXB1Q99853 325 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 PECRQ9BY49 303 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 UNKLQ9H9P5 680 aaKnown RBP7.66□□□□□ -1.18
LIG4-204ENST00000611712 RHOFQ9HBH0 211 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 FAM166BA8MTA8 275 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 ZNF587BE7ETH6 402 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 NXPH3O95157 252 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 CCL3P10147 92 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 ZNF32P17041 273 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 DUSP1P28562 367 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 CLDN15P56746 228 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 UBE2NP61088 152 aaKnown RBP7.66□□□□□ -1.18
LIG4-204ENST00000611712 FOXK1P85037 733 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 AVPI1Q5T686 147 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 OSR2Q8N2R0 312 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 SUMF2Q8NBJ7 301 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 APCDD1LQ8NCL9 501 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 ZNF385AQ96PM9 386 aaKnown RBP7.66□□□□□ -1.18
LIG4-204ENST00000611712 UTP23Q9BRU9 249 aaKnown RBP7.66□□□□□ -1.18
LIG4-204ENST00000611712 PUS1Q9Y606 427 aaKnown RBP eCLIP7.66□□□□□ -1.18
LIG4-204ENST00000611712 SLC25A4P12235 298 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 CCL4P13236 92 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 PNLIPP16233 465 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 GABRA4P48169 554 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 RAC1P63000 192 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 SRPXP78539 464 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 ZNF345Q14585 488 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 ZFP82Q8N141 532 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 THOC3Q96J01 351 aaKnown RBP7.66□□□□□ -1.18
LIG4-204ENST00000611712 PRRX2Q99811 253 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 PLEKHA2Q9HB19 425 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 FAM96BQ9Y3D0 163 aa7.66□□□□□ -1.18
LIG4-204ENST00000611712 DOCK8Q8NF50 2099 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 E5RGE8 158 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 GPR31O00270 319 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 MSTNO14793 375 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 ZNF205O95201 554 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 TIAF1O95411 115 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 IGHMP01871 453 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 CELA2AP08217 269 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 PGA4P0DJD7 388 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 PGA3P0DJD8 388 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 RRADP55042 308 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 RAB35Q15286 201 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 STPG1Q5TH74 334 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 TMEM268Q5VZI3 342 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 DPPA2Q7Z7J5 298 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 GLYATL2Q8WU03 294 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 MESP1Q9BRJ9 268 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 C20orf24Q9BUV8 137 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 NMES1Q9C002 83 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 DUSP15Q9H1R2 295 aaPredicted RBP7.65□□□□□ -1.18
LIG4-204ENST00000611712 CDH20Q9HBT6 801 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 LRFN1Q9P244 771 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 NSG2Q9Y328 171 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 LRRK1Q38SD2 2015 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 OR6C6A6NF89 314 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 NPIPB7O75200 414 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 CD74P04233 296 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 FLI1Q01543 452 aaPredicted RBP7.65□□□□□ -1.18
LIG4-204ENST00000611712 PJVKQ0ZLH3 352 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 RPL7L1Q6DKI1 246 aaKnown RBP7.65□□□□□ -1.18
LIG4-204ENST00000611712 JMJD6Q6NYC1 403 aaPredicted RBP7.65□□□□□ -1.18
LIG4-204ENST00000611712 LILRB2Q8N423 598 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 LHFPL5Q8TAF8 219 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 KCNE4Q8WWG9 221 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 NANOS1Q8WY41 292 aaKnown RBP7.65□□□□□ -1.18
LIG4-204ENST00000611712 SMCO4Q9NRQ5 59 aa7.65□□□□□ -1.18
LIG4-204ENST00000611712 TMEM218A2RU14 115 aa7.65□□□□□ -1.19
LIG4-204ENST00000611712 RAB19A4D1S5 217 aa7.65□□□□□ -1.19
LIG4-204ENST00000611712 CD300LBA8K4G0 201 aa7.65□□□□□ -1.19
LIG4-204ENST00000611712 TRAF3IP2O43734 574 aaPredicted RBP7.65□□□□□ -1.19
LIG4-204ENST00000611712 ATG12O94817 140 aa7.65□□□□□ -1.19
LIG4-204ENST00000611712 NKX2-1P43699 371 aaPredicted RBP7.65□□□□□ -1.19
LIG4-204ENST00000611712 F2RL1P55085 397 aa7.65□□□□□ -1.19
LIG4-204ENST00000611712 SOHLH1Q5JUK2 328 aa7.65□□□□□ -1.19
LIG4-204ENST00000611712 GPR157Q5UAW9 335 aa7.65□□□□□ -1.19
LIG4-204ENST00000611712 TFAP2EQ6VUC0 442 aa7.65□□□□□ -1.19
LIG4-204ENST00000611712 OR2V1Q8NHB1 315 aa7.65□□□□□ -1.19
LIG4-204ENST00000611712 C2CD4CQ8TF44 421 aa7.65□□□□□ -1.19
LIG4-204ENST00000611712 C14orf79Q96F83 325 aa7.65□□□□□ -1.19
LIG4-204ENST00000611712 NPAS1Q99742 590 aa7.65□□□□□ -1.19
LIG4-204ENST00000611712 OCSTAMPQ9BR26 566 aa7.65□□□□□ -1.19
LIG4-204ENST00000611712 TGIF2Q9GZN2 237 aa7.65□□□□□ -1.19
LIG4-204ENST00000611712 CLDN16Q9Y5I7 305 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms