RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 CYSRT1A8MQ03 144 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 LYNX1G3V0Z9 82 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 H3BSH0 61 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 ARL6IP5O75915 188 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 IGHV2-70P01814 119 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 HCKP08631 526 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 ACAA1P09110 424 aaPredicted RBP6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 LYNX1P0DP58 116 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 CD99P14209 185 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 MUC1P15941 1255 aaPredicted RBP6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 PCMT1P22061 227 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 MPZP25189 248 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 PSMB9P28065 219 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 SOX2P48431 317 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 MTCP1P56278 107 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 RPS11P62280 158 aaKnown RBP eCLIP6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 MPPED2Q15777 294 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 MICBQ29980 383 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 ACSM3Q53FZ2 586 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 ARMCX4Q5H9R4 360 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 LIPKQ5VXJ0 399 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 ZNF529Q6P280 563 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 HAGHLQ6PII5 290 aaPredicted RBP6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 LRRC28Q86X40 367 aaPredicted RBP6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 FAM90A1Q86YD7 464 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 CDH26Q8IXH8 852 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 PHC2Q8IXK0 858 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 MKXQ8IYA7 352 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 Q8IYB0 196 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 PIP4P2Q8N4L2 257 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 NKAIN3Q8N8D7 197 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 SCCPDHQ8NBX0 429 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 OR13C9Q8NGT0 318 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 ZNF420Q8TAQ5 688 aaPredicted RBP6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 AQP3Q92482 292 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 RGP1Q92546 391 aaPredicted RBP6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 RPL3LQ92901 407 aaKnown RBP6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 RAB39BQ96DA2 213 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 C18orf12Q96KH6 178 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 DERL3Q96Q80 235 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 GAL3ST1Q99999 423 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 TMED9Q9BVK6 235 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 SLITRK2Q9H156 845 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 TCF7L1Q9HCS4 588 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 UFSP2Q9NUQ7 469 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 NDUFB11Q9NX14 153 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 TREM2Q9NZC2 230 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 PCDHB10Q9UN67 800 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 PDZD2O15018 2839 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 CSMD1Q96PZ7 3565 aa6.31□□□□□ -1.4
CUX2P1-201ENST00000606426 SETXQ7Z333 2677 aaKnown RBP6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 TRBV5-7A0A0A0MS05 114 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 IGKV1-9A0A0C4DH69 117 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 IGHV3-64DA0A0J9YX35 117 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 ISPDA4D126 451 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 OOEPA6NGQ2 149 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 SRRM5B3KS81 715 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 RNF223E7ERA6 249 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 LGALS8O00214 317 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 LMX1BO60663 402 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 NOS1APO75052 506 aaPredicted RBP6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 SC5DO75845 299 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 RGS9O75916 674 aaPredicted RBP6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 CYB5R3P00387 301 aaPredicted RBP6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 LHBP01229 141 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 IGFBP3P17936 291 aaPredicted RBP6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 GLRA1P23415 457 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 BDKRB2P30411 391 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 TGFBR2P37173 567 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 PMELP40967 661 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 BMXP51813 675 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 SMIM21Q3B7S5 101 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 ZNF404Q494X3 552 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 HSD17B12Q53GQ0 312 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 SPRNQ5BIV9 151 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 SYT6Q5T7P8 510 aaPredicted RBP6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 TEX36Q5VZQ5 186 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 FIP1L1Q6UN15 594 aaKnown RBP6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 WDR82Q6UXN9 313 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 UNQ9370/PRO34162Q6UXP9 181 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 DCDC5Q6ZRR9 648 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 NLRC3Q7RTR2 1065 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 WDR86Q86TI4 376 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 C11orf53Q8IXP5 236 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 SAXO1Q8IYX7 474 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 GCSAMQ8N6F7 178 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 PNLDC1Q8NA58 520 aaKnown RBP6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 ZSCAN4Q8NAM6 433 aaPredicted RBP6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 POC1AQ8NBT0 407 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 TRMT10AQ8TBZ6 339 aaKnown RBP6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 LRRC29Q8WV35 223 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 TMIGD2Q96BF3 282 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 FOXRED1Q96CU9 486 aaPredicted RBP6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 COX4I2Q96KJ9 171 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 OR14A2Q96R54 314 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 TMUB1Q9BVT8 246 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 DNTTIP1Q9H147 329 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 PPP1R3EQ9H7J1 279 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 PCDHB16Q9NRJ7 776 aa6.3□□□□□ -1.4
CUX2P1-201ENST00000606426 TAS2R4Q9NYW5 299 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms