RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 TEX36Q5VZQ5 186 aa11.88□□□□□ -0.51
TUBE1-211ENST00000605457 FAM90A1Q86YD7 464 aa11.88□□□□□ -0.51
TUBE1-211ENST00000605457 OR5AK2Q8NH90 309 aa11.88□□□□□ -0.51
TUBE1-211ENST00000605457 PP6455Q8WZ26 134 aa11.88□□□□□ -0.51
TUBE1-211ENST00000605457 TRIM36Q9NQ86 728 aa11.88□□□□□ -0.51
TUBE1-211ENST00000605457 HIF1ANQ9NWT6 349 aa11.88□□□□□ -0.51
TUBE1-211ENST00000605457 CHCHD3Q9NX63 227 aaKnown RBP11.88□□□□□ -0.51
TUBE1-211ENST00000605457 MIOXQ9UGB7 285 aa11.88□□□□□ -0.51
TUBE1-211ENST00000605457 TRAV38-1A0A0B4J264 116 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 TRAV20A0A0B4J274 112 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 TRBV2A0A0J9YWF9 115 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 A8MXK9 166 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 CRLF1O75462 422 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 RHBDL1O75783 438 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 GATBO75879 557 aaKnown RBP11.87□□□□□ -0.51
TUBE1-211ENST00000605457 LALBAP00709 142 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 CPT2P23786 658 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 RIPPLY3P57055 190 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 KCNJ8Q15842 424 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 ESCO2Q56NI9 601 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 RPL22L1Q6P5R6 122 aaKnown RBP11.87□□□□□ -0.51
TUBE1-211ENST00000605457 LYPD2Q6UXB3 125 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 STX19Q8N4C7 294 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 OR13C3Q8NGS6 347 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 AQP3Q92482 292 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 NEIL1Q96FI4 390 aaPredicted RBP11.87□□□□□ -0.51
TUBE1-211ENST00000605457 TECTBQ96PL2 329 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 COMMD4Q9H0A8 199 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 ERVK-18Q9QC07 812 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 LRCH1Q9Y2L9 728 aa11.87□□□□□ -0.51
TUBE1-211ENST00000605457 KIAA1324LA8MWY0 1029 aaPredicted RBP11.86□□□□□ -0.51
TUBE1-211ENST00000605457 TNFRSF13BO14836 293 aaPredicted RBP11.86□□□□□ -0.51
TUBE1-211ENST00000605457 AKR7A2O43488 359 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 FOXH1O75593 365 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 RPSAP08865 295 aaKnown RBP11.86□□□□□ -0.51
TUBE1-211ENST00000605457 MUC1P15941 1255 aaPredicted RBP11.86□□□□□ -0.51
TUBE1-211ENST00000605457 ZFP36P26651 326 aaKnown RBP11.86□□□□□ -0.51
TUBE1-211ENST00000605457 HAAOP46952 286 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 LCN2P80188 198 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 CR1LQ2VPA4 569 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 FAM120AOSQ5T036 256 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 HAGHLQ6PII5 290 aaPredicted RBP11.86□□□□□ -0.51
TUBE1-211ENST00000605457 UTS2BQ765I0 119 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 NLRC3Q7RTR2 1065 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 ZNF573Q86YE8 665 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 TRMT10AQ8TBZ6 339 aaKnown RBP11.86□□□□□ -0.51
TUBE1-211ENST00000605457 NPRL2Q8WTW4 380 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 GATAD2BQ8WXI9 593 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 RGP1Q92546 391 aaPredicted RBP11.86□□□□□ -0.51
TUBE1-211ENST00000605457 FGGYQ96C11 551 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 WDR13Q9H1Z4 485 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 PAK1IP1Q9NWT1 392 aaPredicted RBP11.86□□□□□ -0.51
TUBE1-211ENST00000605457 BABAM2Q9NXR7 383 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 CDC42EP3Q9UKI2 254 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 RAB26Q9ULW5 256 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 POLR3KQ9Y2Y1 108 aaPredicted RBP11.86□□□□□ -0.51
TUBE1-211ENST00000605457 SIRT4Q9Y6E7 314 aaPredicted RBP11.86□□□□□ -0.51
TUBE1-211ENST00000605457 IGHV3OR15-7A0A075B7D8 119 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 J3QT63 122 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 OGG1O15527 345 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 SERPINA3P01011 423 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 CDK1P06493 297 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 ZNF20P17024 532 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 PCMT1P22061 227 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 SLC35A2P78381 396 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 MICBQ29980 383 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 OR8B3Q8NGG8 313 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 C12orf43Q96C57 262 aaKnown RBP11.86□□□□□ -0.51
TUBE1-211ENST00000605457 SMIM19Q96E16 107 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 SEH1LQ96EE3 360 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 OR8B2Q96RD0 313 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 SSBP3Q9BWW4 388 aaPredicted RBP11.86□□□□□ -0.51
TUBE1-211ENST00000605457 SCN3BQ9NY72 215 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 CTSZQ9UBR2 303 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 SLC7A11Q9UPY5 501 aa11.86□□□□□ -0.51
TUBE1-211ENST00000605457 IGKV1-27A0A075B6S5 117 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 PPIAL4CA0A0B4J2A2 164 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 IGKV1-9A0A0C4DH69 117 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 PTGES3LE9PB15 166 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 MYL12BO14950 172 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 PHF1O43189 567 aaPredicted RBP11.85□□□□□ -0.51
TUBE1-211ENST00000605457 NDUFA2O43678 99 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 GYPAP02724 150 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 MPZP25189 248 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 PITPNBP48739 271 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 WNT4P56705 351 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 GMFBP60983 142 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 DOC2BQ14184 412 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 CNN3Q15417 329 aaKnown RBP11.85□□□□□ -0.51
TUBE1-211ENST00000605457 CHRFAM7AQ494W8 412 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 RNLSQ5VYX0 342 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 DMKNQ6E0U4 476 aaPredicted RBP11.85□□□□□ -0.51
TUBE1-211ENST00000605457 ZNF841Q6ZN19 808 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 CALHM1Q8IU99 346 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 ZNF671Q8TAW3 534 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 SGCDQ92629 289 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 CNBD2Q96M20 576 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 ZNF184Q99676 751 aaPredicted RBP11.85□□□□□ -0.51
TUBE1-211ENST00000605457 SHARPINQ9H0F6 387 aa11.85□□□□□ -0.51
TUBE1-211ENST00000605457 LPAR3Q9UBY5 353 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms