RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 ROM1Q03395 351 aa10.23□□□□□ -0.77
TRIM28-212ENST00000597995 SNCBQ16143 134 aa10.23□□□□□ -0.77
TRIM28-212ENST00000597995 STUMQ69YW2 141 aa10.23□□□□□ -0.77
TRIM28-212ENST00000597995 ASRGL1Q7L266 308 aa10.23□□□□□ -0.77
TRIM28-212ENST00000597995 KRT74Q7RTS7 529 aa10.23□□□□□ -0.77
TRIM28-212ENST00000597995 REC114Q7Z4M0 266 aa10.23□□□□□ -0.77
TRIM28-212ENST00000597995 TCEANCQ8N8B7 351 aa10.23□□□□□ -0.77
TRIM28-212ENST00000597995 BEND2Q8NDZ0 799 aa10.23□□□□□ -0.77
TRIM28-212ENST00000597995 CSNK2A3Q8NEV1 391 aa10.23□□□□□ -0.77
TRIM28-212ENST00000597995 OR10Z1Q8NGY1 313 aa10.23□□□□□ -0.77
TRIM28-212ENST00000597995 HPSE2Q8WWQ2 592 aa10.23□□□□□ -0.77
TRIM28-212ENST00000597995 MED30Q96HR3 178 aa10.23□□□□□ -0.77
TRIM28-212ENST00000597995 PAPOLGQ9BWT3 736 aaKnown RBP10.23□□□□□ -0.77
TRIM28-212ENST00000597995 TTTY10Q9BZA0 68 aa10.23□□□□□ -0.77
TRIM28-212ENST00000597995 PPA2Q9H2U2 334 aa10.23□□□□□ -0.77
TRIM28-212ENST00000597995 RGCCQ9H4X1 137 aa10.23□□□□□ -0.77
TRIM28-212ENST00000597995 METTL8Q9H825 291 aaKnown RBP10.23□□□□□ -0.77
TRIM28-212ENST00000597995 NIPAL2Q9H841 368 aa10.23□□□□□ -0.77
TRIM28-212ENST00000597995 HAO2Q9NYQ3 351 aa10.23□□□□□ -0.77
TRIM28-212ENST00000597995 PLXNB1O43157 2135 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 MEIOCA2RUB1 952 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 G3V4G9 280 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 CDIPTO14735 213 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 MAGEB4O15481 346 aaPredicted RBP10.22□□□□□ -0.77
TRIM28-212ENST00000597995 SRSF10O75494 262 aaKnown RBP10.22□□□□□ -0.77
TRIM28-212ENST00000597995 CST4P01036 141 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 IGLV3-1P01715 115 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 GNALP38405 381 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 IL5RAQ01344 420 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 MFGE8Q08431 387 aaPredicted RBP10.22□□□□□ -0.77
TRIM28-212ENST00000597995 PRDX4Q13162 271 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 KLRD1Q13241 179 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 IKZF1Q13422 519 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 BLMHQ13867 455 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 FAM76BQ5HYJ3 339 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 SAMD5Q5TGI4 173 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 DEGS2Q6QHC5 323 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 ZNF788Q6ZQV5 615 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 MEPCEQ7L2J0 689 aaKnown RBP10.22□□□□□ -0.77
TRIM28-212ENST00000597995 KRT77Q7Z794 578 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 ZDHHC13Q8IUH4 622 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 FTMTQ8N4E7 242 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 DTX3Q8N9I9 347 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 OR5T2Q8NGG2 359 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 TMEM163Q8TC26 289 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 OR5P3Q8WZ94 311 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 H1FXQ92522 213 aaKnown RBP10.22□□□□□ -0.77
TRIM28-212ENST00000597995 RAB3IPQ96QF0 476 aaPredicted RBP10.22□□□□□ -0.77
TRIM28-212ENST00000597995 OR8B4Q96RC9 309 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 IL4I1Q96RQ9 567 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 CIB1Q99828 191 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 MICU1Q9BPX6 476 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 TEX12Q9BXU0 123 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 FAM234AQ9H0X4 552 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 ADGRL4Q9HBW9 690 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 DNAJB11Q9UBS4 358 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 MAB21L2Q9Y586 359 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 MPC1Q9Y5U8 109 aa10.22□□□□□ -0.77
TRIM28-212ENST00000597995 A0A0U1RQV5 110 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 TMEM269A0A1B0GVZ9 245 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 A0A1W2PRD5 423 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 A0A1W2PRF3 423 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 A0A1W2PRM7 423 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 NKX6-3A6NJ46 265 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 TMEM210A6NLX4 147 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 ANXA2P2A6NMY6 339 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 DCTDP32321 178 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 EFNB2P52799 333 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 DLX1P56177 255 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 CAV3P56539 151 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 PRB3Q04118 309 aaPredicted RBP10.21□□□□□ -0.77
TRIM28-212ENST00000597995 AANATQ16613 207 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 DMRTC1Q5HYR2 192 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 NXNL2Q5VZ03 156 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 KCTD18Q6PI47 426 aaPredicted RBP10.21□□□□□ -0.77
TRIM28-212ENST00000597995 ZNF679Q8IYX0 411 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 CFHR4Q92496 578 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 PIGCQ92535 297 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 RPL3LQ92901 407 aaKnown RBP10.21□□□□□ -0.77
TRIM28-212ENST00000597995 CNN2Q99439 309 aaKnown RBP10.21□□□□□ -0.77
TRIM28-212ENST00000597995 APOL4Q9BPW4 351 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 RTL8AQ9BWD3 113 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 PBOV1Q9GZY1 135 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 MEGF9Q9H1U4 602 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 RANBP3Q9H6Z4 567 aaPredicted RBP10.21□□□□□ -0.77
TRIM28-212ENST00000597995 ABCB9Q9NP78 766 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 SLC25A10Q9UBX3 287 aaPredicted RBP10.21□□□□□ -0.77
TRIM28-212ENST00000597995 OAZ3Q9UMX2 235 aa10.21□□□□□ -0.77
TRIM28-212ENST00000597995 SF3B6Q9Y3B4 125 aaKnown RBP10.21□□□□□ -0.77
TRIM28-212ENST00000597995 ACOD1A6NK06 481 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 H3BUX3 64 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 SIGLEC5O15389 551 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 TFF1P04155 84 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 ACAA1P09110 424 aaPredicted RBP10.2□□□□□ -0.78
TRIM28-212ENST00000597995 SELLP14151 372 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 CXCR4P61073 352 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 DGUOKQ16854 277 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 LCN1P1Q5VSP4 162 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 HIST2H2BDQ6DRA6 164 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 ZNF322Q6U7Q0 402 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms