RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 A0A1B0GWJ7 208 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 SULT1B1O43704 296 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 CDC14BO60729 498 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 MAS1P04201 325 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 ADRA2CP18825 462 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 RAB3AP20336 220 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 SERPINB10P48595 397 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 CARTPTQ16568 116 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 CEP78Q5JTW2 689 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 USP43Q70EL4 1123 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 TPRA1Q86W33 373 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 OR10AD1Q8NGE0 317 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 TMEM100Q9NV29 134 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 MPC1Q9Y5U8 109 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 CACNG2Q9Y698 323 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 SONP18583 2426 aaKnown RBP12.69□□□□□ -0.38
TRIM28-207ENST00000597136 IGHV3-64DA0A0J9YX35 117 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 TPD52L2O43399 206 aaKnown RBP12.69□□□□□ -0.38
TRIM28-207ENST00000597136 CDRT1O95170 752 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 IL1AP01583 271 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 ADH4P08319 380 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 CLEC2LP0C7M8 214 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 ATF1P18846 271 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 RPS19P39019 145 aaKnown RBP12.69□□□□□ -0.38
TRIM28-207ENST00000597136 CEACAM21Q3KPI0 293 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 PLCXD3Q63HM9 321 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 MOB3CQ70IA8 216 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 ZDHHC23Q8IYP9 409 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 MAPK1IP1LQ8NDC0 245 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 OR13G1Q8NGZ3 307 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 DVL3Q92997 716 aaPredicted RBP12.69□□□□□ -0.38
TRIM28-207ENST00000597136 ELMOD3Q96FG2 381 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 TECTBQ96PL2 329 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 DCSTAMPQ9H295 470 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 TMEM138Q9NPI0 162 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 CYSLTR2Q9NS75 346 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 NKIRAS2Q9NYR9 191 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 ZDHHC8Q9ULC8 765 aa12.69□□□□□ -0.38
TRIM28-207ENST00000597136 MEGF11A6BM72 1044 aa12.68□□□□□ -0.38
TRIM28-207ENST00000597136 F5H5P2 479 aa12.68□□□□□ -0.38
TRIM28-207ENST00000597136 ERCC1P07992 297 aaPredicted RBP12.68□□□□□ -0.38
TRIM28-207ENST00000597136 BDKRB2P30411 391 aa12.68□□□□□ -0.38
TRIM28-207ENST00000597136 MXD1Q05195 221 aa12.68□□□□□ -0.38
TRIM28-207ENST00000597136 CLEC2AQ6UVW9 174 aa12.68□□□□□ -0.38
TRIM28-207ENST00000597136 NR2C2APQ86WQ0 139 aa12.68□□□□□ -0.38
TRIM28-207ENST00000597136 OR52N4Q8NGI2 321 aa12.68□□□□□ -0.38
TRIM28-207ENST00000597136 C10orf105Q8TEF2 133 aa12.68□□□□□ -0.38
TRIM28-207ENST00000597136 NPRL2Q8WTW4 380 aa12.68□□□□□ -0.38
TRIM28-207ENST00000597136 HPSE2Q8WWQ2 592 aa12.68□□□□□ -0.38
TRIM28-207ENST00000597136 OR5P3Q8WZ94 311 aa12.68□□□□□ -0.38
TRIM28-207ENST00000597136 FAM168AQ92567 244 aa12.68□□□□□ -0.38
TRIM28-207ENST00000597136 ITPKCQ96DU7 683 aa12.68□□□□□ -0.38
TRIM28-207ENST00000597136 GFI1Q99684 422 aa12.68□□□□□ -0.38
TRIM28-207ENST00000597136 SLC22A4Q9H015 551 aa12.68□□□□□ -0.38
TRIM28-207ENST00000597136 ABCB9Q9NP78 766 aa12.68□□□□□ -0.38
TRIM28-207ENST00000597136 DECR2Q9NUI1 292 aa12.68□□□□□ -0.38
TRIM28-207ENST00000597136 CGGBP1Q9UFW8 167 aaPredicted RBP12.68□□□□□ -0.38
TRIM28-207ENST00000597136 AK6Q9Y3D8 172 aaKnown RBP12.68□□□□□ -0.38
TRIM28-207ENST00000597136 SMIM30A4D0T7 59 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 RNF223E7ERA6 249 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 H7C1Q1 480 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 PDCD5O14737 125 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 ALDOBP05062 364 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 OCMP0CE72 109 aaPredicted RBP12.67□□□□□ -0.38
TRIM28-207ENST00000597136 RAB3BP20337 219 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 PRKACBP22694 351 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 AZGP1P25311 298 aaKnown RBP12.67□□□□□ -0.38
TRIM28-207ENST00000597136 PDLIM4P50479 330 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 OR10A3P58181 314 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 TNFAIP6P98066 277 aaPredicted RBP12.67□□□□□ -0.38
TRIM28-207ENST00000597136 CNN3Q15417 329 aaKnown RBP12.67□□□□□ -0.38
TRIM28-207ENST00000597136 OR8G1Q15617 311 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 PCGF3Q3KNV8 242 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 DNAAF1Q8NEP3 725 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 OR5A2Q8NGI9 324 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 ITLN1Q8WWA0 313 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 SPSB1Q96BD6 273 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 HIST1H2AAQ96QV6 131 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 ADAT1Q9BUB4 502 aaKnown RBP12.67□□□□□ -0.38
TRIM28-207ENST00000597136 TMUB1Q9BVT8 246 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 FGF23Q9GZV9 251 aaPredicted RBP12.67□□□□□ -0.38
TRIM28-207ENST00000597136 DCAF16Q9NXF7 216 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 SLC7A11Q9UPY5 501 aa12.67□□□□□ -0.38
TRIM28-207ENST00000597136 ANXA2P2A6NMY6 339 aa12.66□□□□□ -0.38
TRIM28-207ENST00000597136 VWC2LB2RUY7 222 aa12.66□□□□□ -0.38
TRIM28-207ENST00000597136 CD55P08174 381 aa12.66□□□□□ -0.38
TRIM28-207ENST00000597136 HCKP08631 526 aa12.66□□□□□ -0.38
TRIM28-207ENST00000597136 CD37P11049 281 aa12.66□□□□□ -0.38
TRIM28-207ENST00000597136 FUT6P51993 359 aa12.66□□□□□ -0.38
TRIM28-207ENST00000597136 CAV3P56539 151 aa12.66□□□□□ -0.38
TRIM28-207ENST00000597136 MAB21L1Q13394 359 aa12.66□□□□□ -0.38
TRIM28-207ENST00000597136 FAM209AQ5JX71 171 aa12.66□□□□□ -0.38
TRIM28-207ENST00000597136 DDI2Q5TDH0 399 aa12.66□□□□□ -0.38
TRIM28-207ENST00000597136 RNF144BQ7Z419 303 aa12.66□□□□□ -0.38
TRIM28-207ENST00000597136 NKAIN3Q8N8D7 197 aa12.66□□□□□ -0.38
TRIM28-207ENST00000597136 OR8S1Q8NH09 359 aa12.66□□□□□ -0.38
TRIM28-207ENST00000597136 TRMT10AQ8TBZ6 339 aaKnown RBP12.66□□□□□ -0.38
TRIM28-207ENST00000597136 RDH5Q92781 318 aa12.66□□□□□ -0.38
TRIM28-207ENST00000597136 SPACA5Q96QH8 159 aa12.66□□□□□ -0.38
TRIM28-207ENST00000597136 SAP30LQ9HAJ7 183 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms