RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 ADAM20O43506 726 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 WIPF1O43516 503 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 PLATP00750 562 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 WNT2P09544 360 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 CCDC159P0C7I6 412 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 OCM2P0CE71 109 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 OCMP0CE72 109 aaPredicted RBP9.27□□□□□ -0.93
LIG1-211ENST00000596457 MYF6P23409 242 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 ZFP36P26651 326 aaKnown RBP9.27□□□□□ -0.93
LIG1-211ENST00000596457 HAAOP46952 286 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 HSPA13P48723 471 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 GNB2P62879 340 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 MRPL28Q13084 256 aaKnown RBP9.27□□□□□ -0.93
LIG1-211ENST00000596457 UBE2V2Q15819 145 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 CHRFAM7AQ494W8 412 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 FAM120AOSQ5T036 256 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 XAF1Q6GPH4 301 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 ZFP41Q8N8Y5 198 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 CCDC54Q8NEL0 328 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 OR8B3Q8NGG8 313 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 OR51A4Q8NGJ6 313 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 ZNF671Q8TAW3 534 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 FBLIM1Q8WUP2 373 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 ITFG2Q969R8 447 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 ADAT3Q96EY9 351 aaPredicted RBP9.27□□□□□ -0.93
LIG1-211ENST00000596457 NEIL1Q96FI4 390 aaPredicted RBP9.27□□□□□ -0.93
LIG1-211ENST00000596457 OR8B2Q96RD0 313 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 JAM3Q9BX67 310 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 OR51I2Q9H344 312 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 PLCXD1Q9NUJ7 323 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 BABAM2Q9NXR7 383 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 CNOT2Q9NZN8 540 aaKnown RBP9.27□□□□□ -0.93
LIG1-211ENST00000596457 LPAR3Q9UBY5 353 aa9.27□□□□□ -0.93
LIG1-211ENST00000596457 TRAV20A0A0B4J274 112 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 TMEM212A6NML5 194 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 DHRS7CA6NNS2 312 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 F5H0A9 414 aaPredicted RBP9.26□□□□□ -0.93
LIG1-211ENST00000596457 MYL12BO14950 172 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 SYNGR1O43759 233 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 FOXH1O75593 365 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 GATBO75879 557 aaKnown RBP9.26□□□□□ -0.93
LIG1-211ENST00000596457 ZFPL1O95159 310 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 LHBP01229 141 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 TFF1P04155 84 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 ISG15P05161 165 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 PIPP12273 146 aaPredicted RBP9.26□□□□□ -0.93
LIG1-211ENST00000596457 HNF1AP20823 631 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 GLRA1P23415 457 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 C21orf33P30042 268 aaPredicted RBP9.26□□□□□ -0.93
LIG1-211ENST00000596457 SOX2P48431 317 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 PITPNBP48739 271 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 KCNJ8Q15842 424 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 MICBQ29980 383 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 DCAF12L2Q5VW00 463 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 TMEM42Q69YG0 159 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 RPL22L1Q6P5R6 122 aaKnown RBP9.26□□□□□ -0.93
LIG1-211ENST00000596457 DCDC5Q6ZRR9 648 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 Q6ZSR3 168 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 NLRC3Q7RTR2 1065 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 ANGPTL5Q86XS5 388 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 FAM90A1Q86YD7 464 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 ZNF573Q86YE8 665 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 AQP3Q92482 292 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 MYDGFQ969H8 173 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 BORCS8Q96FH0 119 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 ZNF488Q96MN9 340 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 TECTBQ96PL2 329 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 CCL13Q99616 98 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 SSBP3Q9BWW4 388 aaPredicted RBP9.26□□□□□ -0.93
LIG1-211ENST00000596457 TLNRD1Q9H1K6 362 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 WDR13Q9H1Z4 485 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 TRIM36Q9NQ86 728 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 CDC42EP3Q9UKI2 254 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 DHDHQ9UQ10 334 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 SIRT4Q9Y6E7 314 aaPredicted RBP9.26□□□□□ -0.93
LIG1-211ENST00000596457 MALRD1Q5VYJ5 2156 aa9.26□□□□□ -0.93
LIG1-211ENST00000596457 ARHGAP32A7KAX9 2087 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 PQLC2LA1A4F0 135 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 SRRM5B3KS81 715 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 LALBAP00709 142 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 CDK1P06493 297 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 RPSAP08865 295 aaKnown RBP9.25□□□□□ -0.93
LIG1-211ENST00000596457 ATF1P18846 271 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 PCMT1P22061 227 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 SRP14P37108 136 aaKnown RBP9.25□□□□□ -0.93
LIG1-211ENST00000596457 GABRA2P47869 451 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 TGM4P49221 684 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 FUT6P51993 359 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 ATP1B3P54709 279 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 CDK5R1Q15078 307 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 CNN3Q15417 329 aaKnown RBP9.25□□□□□ -0.93
LIG1-211ENST00000596457 FAM76BQ5HYJ3 339 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 KRT74Q7RTS7 529 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 EGFL6Q8IUX8 553 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 OR13C9Q8NGT0 318 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 OR10Z1Q8NGY1 313 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 OR52N1Q8NH53 320 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 PP6455Q8WZ26 134 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 SGCDQ92629 289 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 RFT1Q96AA3 541 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms