RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CENPMQ9NSP4 180 aa16.79■□□□□ 0.28
LSM4-203ENST00000593829 IGLV3-9A0A075B6K5 115 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 TRAV6A0A075B6T7 132 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 DAPL1A0PJW8 107 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 SLC22A31A6NKX4 558 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 J3QW42 95 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 NDUFS7O75251 213 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 TAGLNQ01995 201 aaKnown RBP16.78■□□□□ 0.28
LSM4-203ENST00000593829 OR8H3Q8N146 312 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 MS4A15Q8N5U1 240 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 ZNF454Q8N9F8 522 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 OR56B4Q8NH76 319 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 SPTSSAQ969W0 71 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 VRK1Q99986 396 aaPredicted RBP16.78■□□□□ 0.28
LSM4-203ENST00000593829 MYEF2Q9P2K5 600 aaKnown RBP16.78■□□□□ 0.28
LSM4-203ENST00000593829 UBQLN2Q9UHD9 624 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 M0R233 179 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 BET1O15155 118 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 H2AFB2P0C5Z0 115 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 ACSM4P0C7M7 580 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 PRKACBP22694 351 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 NAA10P41227 235 aaPredicted RBP16.78■□□□□ 0.28
LSM4-203ENST00000593829 TAF13Q15543 124 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 LGALSLQ3ZCW2 172 aaPredicted RBP16.78■□□□□ 0.28
LSM4-203ENST00000593829 MBNL2Q5VZF2 373 aaKnown RBP16.78■□□□□ 0.28
LSM4-203ENST00000593829 KRTAP1-3Q8IUG1 177 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 OR5L1Q8NGL2 311 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 OTOSQ8NHW6 89 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 KLF14Q8TD94 323 aaPredicted RBP16.78■□□□□ 0.28
LSM4-203ENST00000593829 APOBEC3DQ96AK3 386 aaPredicted RBP16.78■□□□□ 0.28
LSM4-203ENST00000593829 ABHD6Q9BV23 337 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 DLL4Q9NR61 685 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 GPR160Q9UJ42 338 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 STARD10Q9Y365 291 aa16.78■□□□□ 0.28
LSM4-203ENST00000593829 ARID1AO14497 2285 aa16.77■□□□□ 0.28
LSM4-203ENST00000593829 PRRC2AP48634 2157 aaKnown RBP16.77■□□□□ 0.28
LSM4-203ENST00000593829 ZNF878C9JN71 531 aa16.77■□□□□ 0.28
LSM4-203ENST00000593829 CXCL3P19876 107 aa16.77■□□□□ 0.28
LSM4-203ENST00000593829 DMKNQ6E0U4 476 aaPredicted RBP16.77■□□□□ 0.28
LSM4-203ENST00000593829 KRT74Q7RTS7 529 aa16.77■□□□□ 0.28
LSM4-203ENST00000593829 SLC16A9Q7RTY1 509 aa16.77■□□□□ 0.28
LSM4-203ENST00000593829 CEACAM19Q7Z692 300 aa16.77■□□□□ 0.28
LSM4-203ENST00000593829 RAB1BQ9H0U4 201 aa16.77■□□□□ 0.28
LSM4-203ENST00000593829 MS4A5Q9H3V2 200 aa16.77■□□□□ 0.28
LSM4-203ENST00000593829 HAO2Q9NYQ3 351 aa16.77■□□□□ 0.28
LSM4-203ENST00000593829 TAAR3PQ9P1P4 343 aa16.77■□□□□ 0.28
LSM4-203ENST00000593829 M0R135 149 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 PRAF2O60831 178 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 SERPINA3P01011 423 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 IGHV3-13P01766 116 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 RRASP10301 218 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 MPV17P39210 176 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 ALDH3B1P43353 468 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 EFNA4P52798 201 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 OR10A3P58181 314 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 KLF9Q13886 244 aaPredicted RBP16.76■□□□□ 0.27
LSM4-203ENST00000593829 NKPD1Q17RQ9 610 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 WFDC11Q8NEX6 87 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 THEM6Q8WUY1 208 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 RNF133Q8WVZ7 376 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 ZNF799Q96GE5 643 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 PGLYRP3Q96LB9 341 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 C1QTNF5Q9BXJ0 243 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 TMEM127O75204 238 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 CD1AP06126 327 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 MRPL3P09001 348 aaKnown RBP16.76■□□□□ 0.27
LSM4-203ENST00000593829 RAB3BP20337 219 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 GIFP27352 417 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 OTX1P32242 354 aaPredicted RBP16.76■□□□□ 0.27
LSM4-203ENST00000593829 SRP9P49458 86 aaKnown RBP16.76■□□□□ 0.27
LSM4-203ENST00000593829 GRB2P62993 217 aaKnown RBP16.76■□□□□ 0.27
LSM4-203ENST00000593829 ACTC1P68032 377 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 ACTA1P68133 377 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 EXOSC2Q13868 293 aaKnown RBP16.76■□□□□ 0.27
LSM4-203ENST00000593829 GGTLC2Q14390 218 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 AANATQ16613 207 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 COLCA1Q6ZS62 124 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 RHOUQ7L0Q8 258 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 COMMD7Q86VX2 200 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 UXS1Q8NBZ7 420 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 CNN2Q99439 309 aaKnown RBP16.76■□□□□ 0.27
LSM4-203ENST00000593829 POFUT1Q9H488 388 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 PLEKHA1Q9HB21 404 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 LAMP5Q9UJQ1 280 aa16.76■□□□□ 0.27
LSM4-203ENST00000593829 MAP1AP78559 2803 aaPredicted RBP16.76■□□□□ 0.27
LSM4-203ENST00000593829 ARFGEF3Q5TH69 2177 aa16.75■□□□□ 0.27
LSM4-203ENST00000593829 F12P00748 615 aaPredicted RBP16.75■□□□□ 0.27
LSM4-203ENST00000593829 LCATP04180 440 aa16.75■□□□□ 0.27
LSM4-203ENST00000593829 ERCC1P07992 297 aaPredicted RBP16.75■□□□□ 0.27
LSM4-203ENST00000593829 C4BPBP20851 252 aa16.75■□□□□ 0.27
LSM4-203ENST00000593829 NAA40Q86UY6 237 aa16.75■□□□□ 0.27
LSM4-203ENST00000593829 ZCCHC24Q8N2G6 241 aaKnown RBP16.75■□□□□ 0.27
LSM4-203ENST00000593829 AMELYQ99218 206 aa16.75■□□□□ 0.27
LSM4-203ENST00000593829 I3L521 148 aa16.74■□□□□ 0.27
LSM4-203ENST00000593829 MPC2O95563 127 aa16.74■□□□□ 0.27
LSM4-203ENST00000593829 SLC6A9P48067 706 aa16.74■□□□□ 0.27
LSM4-203ENST00000593829 DHODHQ02127 395 aa16.74■□□□□ 0.27
LSM4-203ENST00000593829 DRAM2Q6UX65 266 aa16.74■□□□□ 0.27
LSM4-203ENST00000593829 TGIF2LYQ8IUE0 185 aa16.74■□□□□ 0.27
LSM4-203ENST00000593829 SNX33Q8WV41 574 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms