RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 CBLN4Q9NTU7 201 aa10.15□□□□□ -0.78
DDX39A-219ENST00000592927 PTTG3PQ9NZH4 202 aa10.15□□□□□ -0.78
DDX39A-219ENST00000592927 PIGLQ9Y2B2 252 aa10.15□□□□□ -0.78
DDX39A-219ENST00000592927 CADP27708 2225 aa10.15□□□□□ -0.78
DDX39A-219ENST00000592927 C5orf63A6NC05 138 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 SLC17A2O00624 439 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 CTDSP2O14595 271 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 MAGEB3O15480 346 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 LMX1BO60663 402 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 ATF1P18846 271 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 ANOS1P23352 680 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 EVX1P49640 407 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 GSK3AP49840 483 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 SNRPD2P62316 118 aaKnown RBP10.14□□□□□ -0.79
DDX39A-219ENST00000592927 ZNF45Q02386 682 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 MSMPQ1L6U9 139 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 SPANXN2Q5MJ10 180 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 MBNL2Q5VZF2 373 aaKnown RBP10.14□□□□□ -0.79
DDX39A-219ENST00000592927 KRT74Q7RTS7 529 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 MRPL21Q7Z2W9 205 aaKnown RBP10.14□□□□□ -0.79
DDX39A-219ENST00000592927 CCDC190Q86UF4 302 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 DTX2Q86UW9 622 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 LRP11Q86VZ4 500 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 FTMTQ8N4E7 242 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 CSNK2A3Q8NEV1 391 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 OR6M1Q8NGM8 313 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 OR2AE1Q8NHA4 323 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 PIGTQ969N2 578 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 CMBLQ96DG6 245 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 CPNE2Q96FN4 548 aaPredicted RBP10.14□□□□□ -0.79
DDX39A-219ENST00000592927 PERPQ96FX8 193 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 SLC30A2Q9BRI3 323 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 UQCC2Q9BRT2 126 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 SOX7Q9BT81 388 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 TRAF4Q9BUZ4 470 aaPredicted RBP10.14□□□□□ -0.79
DDX39A-219ENST00000592927 CHST5Q9GZS9 411 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 HEATR1Q9H583 2144 aaKnown RBP10.14□□□□□ -0.79
DDX39A-219ENST00000592927 PLGRKTQ9HBL7 147 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 ABCB9Q9NP78 766 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 COMMD3Q9UBI1 195 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 STEAP1Q9UHE8 339 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 GPR160Q9UJ42 338 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 SPATA2Q9UM82 520 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 ETV7Q9Y603 341 aa10.14□□□□□ -0.79
DDX39A-219ENST00000592927 CHD3Q12873 2000 aaKnown RBP10.13□□□□□ -0.79
DDX39A-219ENST00000592927 ZNF816-ZNF321PA0A0X1KG74 233 aa10.13□□□□□ -0.79
DDX39A-219ENST00000592927 CD8AP01732 235 aa10.13□□□□□ -0.79
DDX39A-219ENST00000592927 SLC2A2P11168 524 aaPredicted RBP10.13□□□□□ -0.79
DDX39A-219ENST00000592927 RAC2P15153 192 aa10.13□□□□□ -0.79
DDX39A-219ENST00000592927 PTBP1P26599 531 aaKnown RBP eCLIP10.13□□□□□ -0.79
DDX39A-219ENST00000592927 TNFSF8P32971 234 aa10.13□□□□□ -0.79
DDX39A-219ENST00000592927 MPV17P39210 176 aa10.13□□□□□ -0.79
DDX39A-219ENST00000592927 RIN1Q13671 783 aa10.13□□□□□ -0.79
DDX39A-219ENST00000592927 GK2Q14410 553 aaPredicted RBP10.13□□□□□ -0.79
DDX39A-219ENST00000592927 HLXQ14774 488 aaPredicted RBP10.13□□□□□ -0.79
DDX39A-219ENST00000592927 CNN3Q15417 329 aaKnown RBP10.13□□□□□ -0.79
DDX39A-219ENST00000592927 SWI5Q1ZZU3 235 aa10.13□□□□□ -0.79
DDX39A-219ENST00000592927 MST1LQ2TV78 715 aa10.13□□□□□ -0.79
DDX39A-219ENST00000592927 C1orf100Q5SVJ3 147 aa10.13□□□□□ -0.79
DDX39A-219ENST00000592927 CLVS2Q5SYC1 327 aa10.13□□□□□ -0.79
DDX39A-219ENST00000592927 TMEM42Q69YG0 159 aa10.13□□□□□ -0.79
DDX39A-219ENST00000592927 METAP1DQ6UB28 335 aaPredicted RBP10.13□□□□□ -0.79
DDX39A-219ENST00000592927 FBXW12Q6X9E4 464 aa10.13□□□□□ -0.79
DDX39A-219ENST00000592927 LRRC28Q86X40 367 aaPredicted RBP10.13□□□□□ -0.79
DDX39A-219ENST00000592927 OR13C9Q8NGT0 318 aa10.13□□□□□ -0.79
DDX39A-219ENST00000592927 ZNF671Q8TAW3 534 aa10.13□□□□□ -0.79
DDX39A-219ENST00000592927 TRMT10AQ8TBZ6 339 aaKnown RBP10.13□□□□□ -0.79
DDX39A-219ENST00000592927 SORCS2Q96PQ0 1159 aa10.13□□□□□ -0.79
DDX39A-219ENST00000592927 MIXL1Q9H2W2 232 aa10.13□□□□□ -0.79
DDX39A-219ENST00000592927 METTL17Q9H7H0 456 aaPredicted RBP10.13□□□□□ -0.79
DDX39A-219ENST00000592927 TAAR3PQ9P1P4 343 aa10.13□□□□□ -0.79
DDX39A-219ENST00000592927 FBXO9Q9UK97 447 aaPredicted RBP10.13□□□□□ -0.79
DDX39A-219ENST00000592927 IGLV3-9A0A075B6K5 115 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 SPRY1O43609 319 aaPredicted RBP10.12□□□□□ -0.79
DDX39A-219ENST00000592927 TIMM8AO60220 97 aaPredicted RBP10.12□□□□□ -0.79
DDX39A-219ENST00000592927 IGHV3-13P01766 116 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 OCMP0CE72 109 aaPredicted RBP10.12□□□□□ -0.79
DDX39A-219ENST00000592927 SELEP16581 610 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 FAHP16930 419 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 PRKACBP22694 351 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 ACKR3P25106 362 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 CD40LGP29965 261 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 PSG7Q13046 419 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 RAB11BQ15907 218 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 NKPD1Q17RQ9 610 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 HES5Q5TA89 166 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 C11orf71Q6IPW1 123 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 FAM166AQ6J272 317 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 LYPD6Q86Y78 171 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 LAX1Q8IWV1 398 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 MFSD4AQ8N468 514 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 DNAAF1Q8NEP3 725 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 OR51A2Q8NGJ7 313 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 BORCS5Q969J3 196 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 SPSB1Q96BD6 273 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 HAVCR1Q96D42 359 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 C19orf24Q9BVV8 132 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 CACNG6Q9BXT2 260 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 LIN7BQ9HAP6 207 aa10.12□□□□□ -0.79
DDX39A-219ENST00000592927 PALMDQ9NP74 551 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms