RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 DRD5P21918 477 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 SLC2A5P22732 501 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 STOMP27105 288 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 IL12BP29460 328 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 IFNA8P32881 189 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 SERPINF1P36955 418 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 PPICP45877 212 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 PITPNBP48739 271 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 MMP15P51511 669 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 FXYD6P3P58550 94 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 TAS2R41P59536 307 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 BIKQ13323 160 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 IL18Q14116 193 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 FCN2Q15485 313 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 ZNF311Q5JNZ3 666 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 KLF17Q5JT82 389 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-209ENST00000589941 CLLU1Q5K131 121 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 ELFN2Q5R3F8 820 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 GPR139Q6DWJ6 353 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 DMKNQ6E0U4 476 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-209ENST00000589941 RPL13AP3Q6NVV1 102 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 SLC48A1Q6P1K1 146 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 TEX261Q6UWH6 196 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 BTN2A1Q7KYR7 527 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 MEPCEQ7L2J0 689 aaKnown RBP6.52□□□□□ -1.37
SMAD4-209ENST00000589941 MARCH3Q86UD3 253 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 LHFPL3Q86UP9 236 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 CDK20Q8IZL9 346 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 RNF113BQ8IZP6 322 aaKnown RBP6.52□□□□□ -1.37
SMAD4-209ENST00000589941 OR2T33Q8NG76 320 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 OR4F15Q8NGB8 312 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 NANPQ8TBE9 248 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 PMM1Q92871 262 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 YIPF5Q969M3 257 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 CNRIP1Q96F85 164 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-209ENST00000589941 PGLYRP3Q96LB9 341 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 OR7D2Q96RA2 312 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 PRSS27Q9BQR3 290 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 FKRPQ9H9S5 495 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 C12orf10Q9HB07 376 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 CA10Q9NS85 328 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 MED9Q9NWA0 146 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 ABRACLQ9P1F3 81 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 EXTL2Q9UBQ6 330 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 HSPB11Q9Y547 144 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 CACNG2Q9Y698 323 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 SIRT4Q9Y6E7 314 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-209ENST00000589941 U3KQ87 197 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 B9A039 149 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 G3V3Q6 166 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 BET1O15155 118 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 OGG1O15527 345 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 FABP7O15540 132 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 UBL3O95164 117 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 EIF4EP06730 217 aaKnown RBP6.51□□□□□ -1.37
SMAD4-209ENST00000589941 ITGA5P08648 1049 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 ANXA3P12429 323 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 SELEP16581 610 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 CSNK2A2P19784 350 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-209ENST00000589941 TLX1P31314 330 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-209ENST00000589941 MNDAP41218 407 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 GPR6P46095 362 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-209ENST00000589941 NCBP2P52298 156 aaKnown RBP eCLIP6.51□□□□□ -1.37
SMAD4-209ENST00000589941 RASGEF1BQ0VAM2 473 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 MRPL28Q13084 256 aaKnown RBP6.51□□□□□ -1.37
SMAD4-209ENST00000589941 KLF9Q13886 244 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-209ENST00000589941 LASP1Q14847 261 aaKnown RBP6.51□□□□□ -1.37
SMAD4-209ENST00000589941 RNPS1Q15287 305 aaKnown RBP6.51□□□□□ -1.37
SMAD4-209ENST00000589941 EFNB3Q15768 340 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 C9orf135Q5VTT2 229 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 FAM205BPQ63HN1 556 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 OLFML2AQ68BL7 652 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 TYW3Q6IPR3 259 aaKnown RBP6.51□□□□□ -1.37
SMAD4-209ENST00000589941 CDC73Q6P1J9 531 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 SFXN4Q6P4A7 337 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 APOOLQ6UXV4 268 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 RBMS3Q6XE24 437 aaKnown RBP6.51□□□□□ -1.37
SMAD4-209ENST00000589941 ZNF66Q6ZN08 573 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 FRRS1Q6ZNA5 592 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 FCRLAQ7L513 359 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 SHFQ7M4L6 423 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 NKAIN4Q8IVV8 208 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 ELMOD2Q8IZ81 293 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 GTPBP8Q8N3Z3 284 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-209ENST00000589941 OR2C3Q8N628 320 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 ZFP41Q8N8Y5 198 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 SPERTQ8NA61 448 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 SRFBP1Q8NEF9 429 aaKnown RBP6.51□□□□□ -1.37
SMAD4-209ENST00000589941 FAM71CQ8NEG0 241 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 ZNF680Q8NEM1 530 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 BBS1Q8NFJ9 593 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 OR11H7Q8NGC8 314 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 DUSP19Q8WTR2 217 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 PHYHIPQ92561 330 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 SLC25A28Q96A46 364 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 ELP4Q96EB1 424 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 SLC41A3Q96GZ6 507 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 RITA1Q96K30 269 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 KLHL15Q96M94 604 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 VSTM2LQ96N03 204 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms