RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 GPR37O15354 613 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 MTRF1O75570 445 aaKnown RBP6.43□□□□□ -1.38
CDH3-209ENST00000569080 IGHV1-69P01742 117 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 MELTFP08582 738 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 PGA5P0DJD9 388 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 PSG2P11465 335 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 MPZP25189 248 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 DLX1P56177 255 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 GMFBP60983 142 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 ARF6P62330 175 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 RELBQ01201 579 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 RIPPLY1Q0D2K3 151 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 IKZF1Q13422 519 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 KPNB1Q14974 876 aaKnown RBP6.43□□□□□ -1.38
CDH3-209ENST00000569080 PDCD1Q15116 288 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 BCL2L15Q5TBC7 163 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 PLCXD3Q63HM9 321 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 HAGHLQ6PII5 290 aaPredicted RBP6.43□□□□□ -1.38
CDH3-209ENST00000569080 METAP1DQ6UB28 335 aaPredicted RBP6.43□□□□□ -1.38
CDH3-209ENST00000569080 Q6YL49 198 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 KCTD8Q6ZWB6 473 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 VMO1Q7Z5L0 202 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 COMMD2Q86X83 199 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 CATSPERDQ86XM0 798 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 LDLRAD3Q86YD5 345 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 POC1AQ8NBT0 407 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 OR5A2Q8NGI9 324 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 OR8J1Q8NGP2 316 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 GATAD2BQ8WXI9 593 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 RORBQ92753 470 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 LHX4Q969G2 390 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 SLC25A28Q96A46 364 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 EME1Q96AY2 570 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 SDSLQ96GA7 329 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 ZNF747Q9BV97 191 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 RIBC2Q9H4K1 309 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 CNTD2Q9H8S5 307 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 HES4Q9HCC6 221 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 ACOXLQ9NUZ1 547 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 USE1Q9NZ43 259 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 DNAJB11Q9UBS4 358 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 ENPP5Q9UJA9 477 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 OR52A1Q9UKL2 312 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 SLC22A13Q9Y226 551 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 PIGLQ9Y2B2 252 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 MAB21L2Q9Y586 359 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 A0A0U1RQK1 487 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 A0A1B0GVI7 797 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 NKX6-3A6NJ46 265 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 ZNF670-ZNF695F2Z2N8 137 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 RNASEK-C17orf49H0YIS7 233 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 J3QRE1 110 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 J3QT63 122 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 DLGAP1O14490 977 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 EI24O14681 340 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 NDUFB3O43676 98 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 SYNGR1O43759 233 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 NOS1APO75052 506 aaPredicted RBP6.42□□□□□ -1.38
CDH3-209ENST00000569080 CIB2O75838 187 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 NRASP01111 189 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 ACAA1P09110 424 aaPredicted RBP6.42□□□□□ -1.38
CDH3-209ENST00000569080 OR2T7P0C7T2 308 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 GLRA1P23415 457 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 CAV3P56539 151 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 IL13RA1P78552 427 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 ZNF85Q03923 595 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 PRB3Q04118 309 aaPredicted RBP6.42□□□□□ -1.38
CDH3-209ENST00000569080 FOXL1Q12952 345 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 TMED1Q13445 227 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 LRRC10Q5BKY1 277 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 CLVS2Q5SYC1 327 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 HCP5Q6MZN7 132 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 C16orf87Q6PH81 154 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 ACP7Q6ZNF0 438 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 PRSS35Q8N3Z0 413 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 TMEM86BQ8N661 226 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 CD177Q8N6Q3 437 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 C3orf56Q8N813 242 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 ZNRF1Q8ND25 227 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 OR2T27Q8NH04 317 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 UBE2FQ969M7 185 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 HRASLS5Q96KN8 279 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 ZNF488Q96MN9 340 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 MBOAT4Q96T53 435 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 TBX5Q99593 518 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 RBM4BQ9BQ04 359 aaKnown RBP6.42□□□□□ -1.38
CDH3-209ENST00000569080 NRIP2Q9BQI9 281 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 CHIAQ9BZP6 476 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 UNKLQ9H9P5 680 aaKnown RBP6.42□□□□□ -1.38
CDH3-209ENST00000569080 ELL3Q9HB65 397 aaPredicted RBP6.42□□□□□ -1.38
CDH3-209ENST00000569080 NOX4Q9NPH5 578 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 SIRT7Q9NRC8 400 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 GPR173Q9NS66 373 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 SLC25A10Q9UBX3 287 aaPredicted RBP6.42□□□□□ -1.38
CDH3-209ENST00000569080 PCDHGB1Q9Y5G3 927 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 SNX5Q9Y5X3 404 aa6.42□□□□□ -1.38
CDH3-209ENST00000569080 DSCAML1Q8TD84 2053 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 IGKV1-27A0A075B6S5 117 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 FAM181BA6NEQ2 426 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 ANKRD61A6NGH8 418 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms