RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-215	ENST00000566682	BABAM2	Q9NXR7	383 aa		11.45	□□□□□ -0.58
SPG7-215	ENST00000566682	ERVK-18	Q9QC07	812 aa		11.45	□□□□□ -0.58
SPG7-215	ENST00000566682	MIOX	Q9UGB7	285 aa		11.45	□□□□□ -0.58
SPG7-215	ENST00000566682	FN1	P02751	2386 aa	Known RBP	11.45	□□□□□ -0.58
SPG7-215	ENST00000566682	TRAV38-1	A0A0B4J264	116 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	PQLC2L	A1A4F0	135 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	OOEP	A6NGQ2	149 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	TMEM212	A6NML5	194 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	SRRM5	B3KS81	715 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	PTGES3L	E9PB15	166 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	RHBDL1	O75783	438 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	LALBA	P00709	142 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	SERPINA3	P01011	423 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	CCDC159	P0C7I6	412 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	RPS2	P15880	293 aa	Known RBP	11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	CCDC58	Q4VC31	144 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	TEX36	Q5VZQ5	186 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	RPL22L1	Q6P5R6	122 aa	Known RBP	11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	GLCCI1	Q86VQ1	547 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	ZNF485	Q8NCK3	441 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	OR13C3	Q8NGS6	347 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	OR10Z1	Q8NGY1	313 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	OR52N1	Q8NH53	320 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	CHST5	Q9GZS9	411 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	COMMD4	Q9H0A8	199 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	HIF1AN	Q9NWT6	349 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	SCN3B	Q9NY72	215 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	RAB26	Q9ULW5	256 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	SLC7A11	Q9UPY5	501 aa		11.44	□□□□□ -0.58
SPG7-215	ENST00000566682	IGHV3OR15-7	A0A075B7D8	119 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	TRAV20	A0A0B4J274	112 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	TNFRSF13B	O14836	293 aa	Predicted RBP	11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	OGG1	O15527	345 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	AKR7A2	O43488	359 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	CRLF1	O75462	422 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	FOXH1	O75593	365 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	GATB	O75879	557 aa	Known RBP	11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	CDK1	P06493	297 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	RPSA	P08865	295 aa	Known RBP	11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	HOXB4	P17483	251 aa	Predicted RBP	11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	CPT2	P23786	658 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	ZFP36	P26651	326 aa	Known RBP	11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	HAAO	P46952	286 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	GMFB	P60983	142 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	LCN2	P80188	198 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	CDK5R1	Q15078	307 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	KCNJ8	Q15842	424 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	ESCO2	Q56NI9	601 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	HAGHL	Q6PII5	290 aa	Predicted RBP	11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	FAM90A1	Q86YD7	464 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	ZNF573	Q86YE8	665 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	ZNF671	Q8TAW3	534 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	TRMT10A	Q8TBZ6	339 aa	Known RBP	11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	RPS4Y2	Q8TD47	263 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	NPRL2	Q8WTW4	380 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	PP6455	Q8WZ26	134 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	AQP3	Q92482	292 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	SEH1L	Q96EE3	360 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	NEIL1	Q96FI4	390 aa	Predicted RBP	11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	CNBD2	Q96M20	576 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	WDR13	Q9H1Z4	485 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	TRIM36	Q9NQ86	728 aa		11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	SIRT4	Q9Y6E7	314 aa	Predicted RBP	11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	SON	P18583	2426 aa	Known RBP	11.43	□□□□□ -0.58
SPG7-215	ENST00000566682	NSD1	Q96L73	2696 aa	Predicted RBP	11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	FAM230A	A0A1W2PPH8	454 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	PHF1	O43189	567 aa	Predicted RBP	11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	NDUFA2	O43678	99 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	GYPA	P02724	150 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	MUC1	P15941	1255 aa	Predicted RBP	11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	ZNF20	P17024	532 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	GLRA1	P23415	457 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	FUT6	P51993	359 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	CNN3	Q15417	329 aa	Known RBP	11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	MICB	Q29980	383 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	CR1L	Q2VPA4	569 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	FAM120AOS	Q5T036	256 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	UTS2B	Q765I0	119 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	NLRC3	Q7RTR2	1065 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	NANOGP1	Q8N7R0	232 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	OR8B3	Q8NGG8	313 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	SGCD	Q92629	289 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	MYDGF	Q969H8	173 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	TECTB	Q96PL2	329 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	OR8B2	Q96RD0	313 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	LRCH1	Q9Y2L9	728 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	TPRKB	Q9Y3C4	175 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	PCDHGB5	Q9Y5G0	923 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	WNK2	Q9Y3S1	2297 aa		11.42	□□□□□ -0.58
SPG7-215	ENST00000566682	IGKV1-27	A0A075B6S5	117 aa		11.41	□□□□□ -0.58
SPG7-215	ENST00000566682	IGKV1-9	A0A0C4DH69	117 aa		11.41	□□□□□ -0.58
SPG7-215	ENST00000566682	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.41	□□□□□ -0.58
SPG7-215	ENST00000566682		A8MXK9	166 aa		11.41	□□□□□ -0.58
SPG7-215	ENST00000566682	MYL12B	O14950	172 aa		11.41	□□□□□ -0.58
SPG7-215	ENST00000566682	ADAM20	O43506	726 aa		11.41	□□□□□ -0.58
SPG7-215	ENST00000566682	SYNGR1	O43759	233 aa		11.41	□□□□□ -0.58
SPG7-215	ENST00000566682	ATF1	P18846	271 aa		11.41	□□□□□ -0.58

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