RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 RHOVQ96L33 236 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 SNX22Q96L94 193 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 RCC2Q9P258 522 aaKnown RBP11.22□□□□□ -0.61
COMMD4-209ENST00000564068 SPTA1P02549 2419 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 PIGBOS1A0A0B4J2F0 54 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 CYR61O00622 381 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 HMGB3O15347 200 aaKnown RBP11.22□□□□□ -0.61
COMMD4-209ENST00000564068 IAPPP10997 89 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 FGF7P21781 194 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 POLR2GP62487 172 aaKnown RBP eCLIP11.22□□□□□ -0.61
COMMD4-209ENST00000564068 TMEM196Q5HYL7 178 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 THEM4Q5T1C6 240 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 ZNF684Q5T5D7 378 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 DHRS11Q6UWP2 260 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 MISPQ8IVT2 679 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 BHLHE23Q8NDY6 225 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 OR5C1Q8NGR4 320 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.22□□□□□ -0.61
COMMD4-209ENST00000564068 LIPHQ8WWY8 451 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 ENY2Q9NPA8 101 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 GSN-AS1Q9NRJ2 163 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 A0A1W2PPC1 479 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 CDC14BO60729 498 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 RAC2P15153 192 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 MDKP21741 143 aaPredicted RBP11.22□□□□□ -0.61
COMMD4-209ENST00000564068 RRADP55042 308 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 EFNB1P98172 346 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 NAAAQ02083 359 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 C21orf62-AS1Q17RA5 79 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 ZSCAN4Q8NAM6 433 aaPredicted RBP11.22□□□□□ -0.61
COMMD4-209ENST00000564068 KCNIP1Q9NZI2 227 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 ANK1P16157 1881 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 ZNF236Q9UL36 1845 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 TRBV5-5A0A0J9YX44 114 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 ZNF816-ZNF321PA0A0X1KG74 233 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 A0A1W2PP11 408 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 MBP02144 154 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 APOBEC1P41238 236 aaKnown RBP11.21□□□□□ -0.61
COMMD4-209ENST00000564068 BAXQ07812 192 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 ZNF321PQ8N8H1 164 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 CDX2Q99626 313 aaPredicted RBP11.21□□□□□ -0.61
COMMD4-209ENST00000564068 REG4Q9BYZ8 158 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 POMT1Q9Y6A1 747 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 RBBP6Q7Z6E9 1792 aaKnown RBP11.21□□□□□ -0.61
COMMD4-209ENST00000564068 OTOFQ9HC10 1997 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 OTOL1A6NHN0 477 aaPredicted RBP11.21□□□□□ -0.61
COMMD4-209ENST00000564068 CLDN34H7C241 214 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 TFF2Q03403 129 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 MGAT2Q10469 447 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 IL22RA1Q8N6P7 574 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 TMEM18Q96B42 140 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 LRRC3BQ96PB8 259 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 IP6K3Q96PC2 410 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 ANKRD10Q9NXR5 420 aa11.21□□□□□ -0.61
COMMD4-209ENST00000564068 RBFOX3A6NFN3 312 aa11.21□□□□□ -0.62
COMMD4-209ENST00000564068 LMX1BO60663 402 aa11.21□□□□□ -0.62
COMMD4-209ENST00000564068 IGHV3-9P01782 118 aa11.21□□□□□ -0.62
COMMD4-209ENST00000564068 DRD1P21728 446 aa11.21□□□□□ -0.62
COMMD4-209ENST00000564068 HIST1H2BAQ96A08 127 aa11.21□□□□□ -0.62
COMMD4-209ENST00000564068 MOB1AQ9H8S9 216 aa11.21□□□□□ -0.62
COMMD4-209ENST00000564068 ST3GAL6Q9Y274 331 aa11.21□□□□□ -0.62
COMMD4-209ENST00000564068 H3BMH7 237 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 CD1AP06126 327 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 CT45A8P0DMV1 189 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 CT45A9P0DMV2 189 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 HOXC12P31275 282 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 RPL29P47914 159 aaKnown RBP11.2□□□□□ -0.62
COMMD4-209ENST00000564068 PLGLB1Q02325 96 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 CT45A2Q5DJT8 189 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 DHRS7BQ6IAN0 325 aaPredicted RBP11.2□□□□□ -0.62
COMMD4-209ENST00000564068 ADAT3Q96EY9 351 aaPredicted RBP11.2□□□□□ -0.62
COMMD4-209ENST00000564068 FOXQ1Q9C009 403 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 OSGIN2Q9Y236 505 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 TRAV14DV4A0A0A6YYC5 116 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 TLCD2A6NGC4 264 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 PAX6P26367 422 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 PNLIPRP2P54317 469 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 FOXF1Q12946 379 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 ISXQ2M1V0 245 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 NSUN5P2Q63ZY6 315 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 NCR3LG1Q68D85 454 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 FIP1L1Q6UN15 594 aaKnown RBP11.2□□□□□ -0.62
COMMD4-209ENST00000564068 CATSPERDQ86XM0 798 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 SFTPA2Q8IWL1 248 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 FBXL14Q8N1E6 418 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 OR2C3Q8N628 320 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 OR4F5Q8NH21 305 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 OR4F4Q96R69 305 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 PLEKHA3Q9HB20 300 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 PARP11Q9NR21 331 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 LINC01565O15544 149 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 GATCO43716 136 aaKnown RBP11.2□□□□□ -0.62
COMMD4-209ENST00000564068 TUSC2O75896 110 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 MSR1P21757 451 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 BCKDHBP21953 392 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 CALCRP30988 508 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 PMP22Q01453 160 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 C1orf53Q5VUE5 145 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 TXN2Q99757 166 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 ARV1Q9H2C2 271 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms