RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 DTX2Q86UW9 622 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 TMEM200AQ86VY9 491 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 OR2Z1Q8NG97 314 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 OR52N4Q8NGI2 321 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 MCFD2Q8NI22 146 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 TBC1D15Q8TC07 691 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 MRPS24Q96EL2 167 aaKnown RBP10.57□□□□□ -0.72
TPM1-209ENST00000558072 DCUN1D5Q9BTE7 237 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 METTL9Q9H1A3 318 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 FN3KRPQ9HA64 309 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 PLEKHB1Q9UF11 243 aaPredicted RBP10.57□□□□□ -0.72
TPM1-209ENST00000558072 DAPK2Q9UIK4 370 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 PEX16Q9Y5Y5 336 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 GCN1Q92616 2671 aaKnown RBP10.56□□□□□ -0.72
TPM1-209ENST00000558072 LOC100289279A0A1B0GTE1 492 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 LRRC30A6NM36 301 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 J3QT63 122 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 TPD52L2O43399 206 aaKnown RBP10.56□□□□□ -0.72
TPM1-209ENST00000558072 KDM4BO94953 1096 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 PTBP3O95758 552 aaKnown RBP10.56□□□□□ -0.72
TPM1-209ENST00000558072 CSTBP04080 98 aaKnown RBP10.56□□□□□ -0.72
TPM1-209ENST00000558072 IRF2P14316 349 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 ARSBP15848 533 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 ADRA2CP18825 462 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 GATA4P43694 442 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 HAAOP46952 286 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 GPM6AP51674 278 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 TNFAIP6P98066 277 aaPredicted RBP10.56□□□□□ -0.72
TPM1-209ENST00000558072 IL24Q13007 206 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 PDZK1IP1Q13113 114 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 SWI5Q1ZZU3 235 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 AWAT2Q6E213 333 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 ASPHD2Q6ICH7 369 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 FIP1L1Q6UN15 594 aaKnown RBP10.56□□□□□ -0.72
TPM1-209ENST00000558072 CDH24Q86UP0 819 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 LRP11Q86VZ4 500 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 ANGPTL5Q86XS5 388 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 C1orf87Q8N0U7 546 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 OR51A2Q8NGJ7 313 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 OR11L1Q8NGX0 322 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 OR10Z1Q8NGY1 313 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 LILRB1Q8NHL6 650 aaPredicted RBP10.56□□□□□ -0.72
TPM1-209ENST00000558072 KCNG3Q8TAE7 436 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 TRMT10AQ8TBZ6 339 aaKnown RBP10.56□□□□□ -0.72
TPM1-209ENST00000558072 TNFAIP8L1Q8WVP5 186 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 NEU4Q8WWR8 484 aaPredicted RBP10.56□□□□□ -0.72
TPM1-209ENST00000558072 PHF21AQ96BD5 680 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 CLEC4MQ9H2X3 399 aaPredicted RBP10.56□□□□□ -0.72
TPM1-209ENST00000558072 OR51I2Q9H344 312 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 MSL2Q9HCI7 577 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 IL36GQ9NZH8 169 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 FBLN5Q9UBX5 448 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 SPATA2Q9UM82 520 aa10.56□□□□□ -0.72
TPM1-209ENST00000558072 MRPS28Q9Y2Q9 187 aaKnown RBP10.56□□□□□ -0.72
TPM1-209ENST00000558072 PLCE1Q9P212 2302 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 SHISA3A0PJX4 238 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 METTL21EPA6NDL7 271 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 TRAPPC2LH3BP13 241 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 SPRY3O43610 288 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 TPPPO94811 219 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 RAB6AP20340 208 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 MPZP25189 248 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 CFHR2P36980 270 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 TALDO1P37837 337 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 ARL6IP1Q15041 203 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 RSU1Q15404 277 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 ALKBH6Q3KRA9 238 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 TMEM255AQ5JRV8 349 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 FAM166AQ6J272 317 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 ASCL4Q6XD76 172 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 NPRL2Q8WTW4 380 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 C15orf40Q8WUR7 153 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 HPSE2Q8WWQ2 592 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 RAB40AQ8WXH6 277 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 FAM3DQ96BQ1 224 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 ORAI1Q96D31 301 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 CEP19Q96LK0 163 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 URM1Q9BTM9 101 aaKnown RBP10.55□□□□□ -0.72
TPM1-209ENST00000558072 NXF2Q9GZY0 626 aaKnown RBP10.55□□□□□ -0.72
TPM1-209ENST00000558072 TLNRD1Q9H1K6 362 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 CNTD2Q9H8S5 307 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 LIN7BQ9HAP6 207 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 RASL12Q9NYN1 266 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 GLS2Q9UI32 602 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 RAB22AQ9UL26 194 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 ING4Q9UNL4 249 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 DOPEY2Q9Y3R5 2298 aa10.55□□□□□ -0.72
TPM1-209ENST00000558072 A0A0A6YYH2 397 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 A0A0G2JK05 382 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 A6NJ64 397 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 A6NLC8 198 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 MLNRO43193 412 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 NOS1APO75052 506 aaPredicted RBP10.54□□□□□ -0.72
TPM1-209ENST00000558072 CLPXO76031 633 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 IGHV1-46P01743 117 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 CLEC2LP0C7M8 214 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 NAT2P11245 290 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 GTF2F2P13984 249 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 THBS2P35442 1172 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 TGFBR1P36897 503 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms