RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 ECH1Q13011 328 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 CBLN3Q6UW01 205 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 ATG4DQ86TL0 474 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-223ENST00000557005 ZSCAN4Q8NAM6 433 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-223ENST00000557005 NTNG2Q96CW9 530 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 GDF15Q99988 308 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 ADAM19Q9H013 955 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 NAA60Q9H7X0 242 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 RNF212BA8MTL3 300 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 PPP5D1E7EU14 171 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 RER1O15258 196 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 ANKRD55Q3KP44 614 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 Q3ZCU0 254 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 SLC39A7Q92504 469 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 BORCS7Q96B45 105 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 AMELYQ99218 206 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 SOSTQ9BQB4 213 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 C12orf49Q9H741 205 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 PARP11Q9NR21 331 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 PIPOXQ9P0Z9 390 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 SRPK3Q9UPE1 567 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 NOSIPQ9Y314 301 aaKnown RBP4.43□□□□□ -1.7
SYNE2-223ENST00000557005 CHD5Q8TDI0 1954 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 PLXNA3P51805 1871 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 A0A1W2PPC1 479 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 A0A1W2PPQ1 181 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 ZNF320A2RRD8 509 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 OR5H15A6NDH6 313 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 A8MXK9 166 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 H3BMH7 237 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 H3BQ15 152 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 DEGS1O15121 323 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 GREM1O60565 184 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 NRASP01111 189 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 PPICP45877 212 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 DHRS7BQ6IAN0 325 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-223ENST00000557005 C16orf47Q6ZP98 133 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-223ENST00000557005 OSR2Q8N2R0 312 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 OR5C1Q8NGR4 320 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 OR4C3Q8NH37 302 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 RTN4IP1Q8WWV3 396 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-223ENST00000557005 ASB5Q8WWX0 329 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 SNX22Q96L94 193 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 OR2A5Q96R48 311 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 SMIM7Q9BQ49 75 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 GPR87Q9BY21 358 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 BCO1Q9HAY6 547 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 GSN-AS1Q9NRJ2 163 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 RCC2Q9P258 522 aaKnown RBP4.43□□□□□ -1.7
SYNE2-223ENST00000557005 CLCF1Q9UBD9 225 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 KCNE5Q9UJ90 142 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 ELOA3CA0A087WX78 387 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-223ENST00000557005 TRBV5-5A0A0J9YX44 114 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 SEMA7AO75326 666 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 ZFAND5O76080 213 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 COL9A1P20849 921 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 GABRA2P47869 451 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 HSD17B7P56937 341 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 SCAND1P57086 179 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 KRTDAPP60985 99 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 PKIAP61925 76 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 YPEL5P62699 121 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 ARG2P78540 354 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 MRPL49Q13405 166 aaKnown RBP4.43□□□□□ -1.7
SYNE2-223ENST00000557005 GJC3Q8NFK1 279 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 ADAT3Q96EY9 351 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-223ENST00000557005 FAM210BQ96KR6 192 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 OBP2BQ9NPH6 170 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 A0A1B0GX78 115 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 H0YIG0 161 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 ZNF737O75373 536 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 GP1BAP07359 652 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 BCL3P20749 454 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 THBS4P35443 961 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 LPAR6P43657 344 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 VEGFBP49765 207 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 SSR4P51571 173 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 CYB5R2Q6BCY4 276 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 C16orf82Q7Z2V1 217 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 AQP3Q92482 292 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 OXGR1Q96P68 337 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 CCNL2Q96S94 520 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-223ENST00000557005 NRIP2Q9BQI9 281 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 TLNRD1Q9H1K6 362 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 CBY1Q9Y3M2 126 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 CXorf51AA0A1B0GTR3 108 aa4.42□□□□□ -1.7
SYNE2-223ENST00000557005 YKT6O15498 198 aa4.42□□□□□ -1.7
SYNE2-223ENST00000557005 DEDDO75618 318 aa4.42□□□□□ -1.7
SYNE2-223ENST00000557005 P2RY1P47900 373 aa4.42□□□□□ -1.7
SYNE2-223ENST00000557005 SUMO1P63165 101 aaKnown RBP4.42□□□□□ -1.7
SYNE2-223ENST00000557005 PSG6Q00889 435 aa4.42□□□□□ -1.7
SYNE2-223ENST00000557005 PMP22Q01453 160 aa4.42□□□□□ -1.7
SYNE2-223ENST00000557005 DHODHQ02127 395 aa4.42□□□□□ -1.7
SYNE2-223ENST00000557005 ZNF90Q03938 601 aa4.42□□□□□ -1.7
SYNE2-223ENST00000557005 KISS1Q15726 138 aa4.42□□□□□ -1.7
SYNE2-223ENST00000557005 PCK2Q16822 640 aa4.42□□□□□ -1.7
SYNE2-223ENST00000557005 HFEQ30201 348 aa4.42□□□□□ -1.7
SYNE2-223ENST00000557005 PLAC9Q5JTB6 97 aa4.42□□□□□ -1.7
SYNE2-223ENST00000557005 LANCL3Q6ZV70 420 aa4.42□□□□□ -1.7
SYNE2-223ENST00000557005 RTL10Q7L3V2 364 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms