RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 METRNQ9UJH8 293 aa12.65□□□□□ -0.38
ACTN1-217ENST00000556203 IGHV2-70DA0A0C4DH43 119 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 PQLC2LA1A4F0 135 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 H0YAE9 185 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 TMPRSS2O15393 492 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 NPY4RP50391 375 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 CCR9P51686 369 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 PAX2Q02962 417 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 TMEM244Q5VVB8 128 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 C1QL2Q7Z5L3 287 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 OR5T2Q8NGG2 359 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 ZNF671Q8TAW3 534 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 NANPQ8TBE9 248 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 RAB40AQ8WXH6 277 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 AQP3Q92482 292 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 C12orf43Q96C57 262 aaKnown RBP12.64□□□□□ -0.39
ACTN1-217ENST00000556203 CCL13Q99616 98 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 RASSF4Q9H2L5 321 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 FGF20Q9NP95 211 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-217ENST00000556203 SNTG1Q9NSN8 517 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 AUP1Q9Y679 476 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 HSPE1-MOB4S4R3N1 261 aa12.64□□□□□ -0.39
ACTN1-217ENST00000556203 A0A1B0GW55 424 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 IRGMA1A4Y4 181 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 C22orf46C9J442 243 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 ISG15P05161 165 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 GNAO1P09471 354 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 DUX4L2P0CJ85 424 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 DUX4L3P0CJ86 424 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 DUX4L4P0CJ87 422 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 DUX4L5P0CJ88 424 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 DUX4L6P0CJ89 424 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 DUX4L7P0CJ90 424 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 GLRA1P23415 457 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 HAAOP46952 286 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 PAX8Q06710 450 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 ALKBH1Q13686 389 aaKnown RBP12.63□□□□□ -0.39
ACTN1-217ENST00000556203 UBE2V2Q15819 145 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 DUX4L9Q6RFH8 374 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-217ENST00000556203 ZNF573Q86YE8 665 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 C8orf59Q8N0T1 100 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-217ENST00000556203 TRMT10AQ8TBZ6 339 aaKnown RBP12.63□□□□□ -0.39
ACTN1-217ENST00000556203 NPRL2Q8WTW4 380 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 DACT3Q96B18 629 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-217ENST00000556203 C10orf35Q96D05 121 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 JAM3Q9BX67 310 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 CHST5Q9GZS9 411 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 SMURF1Q9HCE7 757 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 KAAG1Q9UBP8 84 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 DUX4Q9UBX2 424 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 SLC7A11Q9UPY5 501 aa12.63□□□□□ -0.39
ACTN1-217ENST00000556203 KIR2DS1A0A191URI9 304 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 FAM230AA0A1W2PPH8 454 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 OR4C45A6NMZ5 311 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 E9PI62 339 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 J3QT63 122 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 DVL1O14640 695 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 SYNGR1O43759 233 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 FCN3O75636 299 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 GATBO75879 557 aaKnown RBP12.62□□□□□ -0.39
ACTN1-217ENST00000556203 SERPINA3P01011 423 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 LIMS3P0CW19 117 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 LIMS4P0CW20 117 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 EPHA1P21709 976 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 DCKP27707 260 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 GBX2P52951 348 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-217ENST00000556203 MRPL28Q13084 256 aaKnown RBP12.62□□□□□ -0.39
ACTN1-217ENST00000556203 STUMQ69YW2 141 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 SLC36A1Q7Z2H8 476 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 EGFL6Q8IUX8 553 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 FAM216BQ8N7L0 139 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 ZNF676Q8N7Q3 588 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 OR10AC1Q8NH08 325 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 NRG4Q8WWG1 115 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 ADAT3Q96EY9 351 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-217ENST00000556203 NUDT16L1Q9BRJ7 211 aaKnown RBP12.62□□□□□ -0.39
ACTN1-217ENST00000556203 NLKQ9UBE8 527 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 HHLA2Q9UM44 414 aa12.62□□□□□ -0.39
ACTN1-217ENST00000556203 NKX6-3A6NJ46 265 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 ENSAO43768 121 aaKnown RBP12.61□□□□□ -0.39
ACTN1-217ENST00000556203 TFF1P04155 84 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 ZNF20P17024 532 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 AMY2BP19961 511 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 ETV1P50549 477 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 SRSF2Q01130 221 aaKnown RBP12.61□□□□□ -0.39
ACTN1-217ENST00000556203 SCGB2A2Q13296 93 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 IKZF1Q13422 519 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 ARMCX4Q5H9R4 360 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 ATPAF1Q5TC12 328 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-217ENST00000556203 CD276Q5ZPR3 534 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 ANGPTL5Q86XS5 388 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 FGFRL1Q8N441 504 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 POC1AQ8NBT0 407 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 OR51A4Q8NGJ6 313 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 PP6455Q8WZ26 134 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 ST8SIA4Q92187 359 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 TFAP2CQ92754 450 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 TMIGD2Q96BF3 282 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 FGGYQ96C11 551 aa12.61□□□□□ -0.39
ACTN1-217ENST00000556203 ZNF488Q96MN9 340 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms