RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 IGKV1-9A0A0C4DH69 117 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 ZNF816-ZNF321PA0A0X1KG74 233 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 DHRS7CA6NNS2 312 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 NOTOA8MTQ0 251 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 NDUFS8O00217 210 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 GMDSO60547 372 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 NDUFS7O75251 213 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 CA6P23280 308 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 MAPK3P27361 379 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-218ENST00000555213 CFPP27918 469 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 TNFSF8P32971 234 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 RIPPLY3P57055 190 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 RIPPLY1Q0D2K3 151 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 CLEC12BQ2HXU8 276 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 ZBTB37Q5TC79 503 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 SFXN4Q6P4A7 337 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 CCDC190Q86UF4 302 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 OR13C3Q8NGS6 347 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 OR5H6Q8NGV6 325 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 UBASH3BQ8TF42 649 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 TSEN15Q8WW01 171 aaKnown RBP9.26□□□□□ -0.93
SHMT2-218ENST00000555213 FAM168AQ92567 244 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 RDH5Q92781 318 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 PIMREGQ9BSJ6 248 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 PPP1R3EQ9H7J1 279 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 DLL4Q9NR61 685 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 C14orf119Q9NWQ9 140 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 IL19Q9UHD0 177 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 V9GY05 133 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 IGHV1-69-2A0A0G2JMI3 117 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 IFITM5A6NNB3 132 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 LILRA1O75019 489 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 ALX3O95076 343 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 PAHP00439 452 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 CST4P01036 141 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 HPXP02790 462 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 MAS1P04201 325 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 MYL9P24844 172 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 SOX6P35712 828 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 ETV6P41212 452 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 UBE2V2Q15819 145 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 HFEQ30201 348 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 IDNKQ5T6J7 187 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 TMEM42Q69YG0 159 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 Q6ZR03 302 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 SERPINA12Q8IW75 414 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 ZDHHC23Q8IYP9 409 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 ZNF525Q8N782 197 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 CELF2-AS1Q8N7Q2 184 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 OR1M1Q8NGA1 313 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 HIST1H2AAQ96QV6 131 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 OR2V2Q96R30 315 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 MICU1Q9BPX6 476 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 RTL8AQ9BWD3 113 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 CHODLQ9H9P2 273 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 SMURF1Q9HCE7 757 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 TCF7L1Q9HCS4 588 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 PIGLQ9Y2B2 252 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 MPC1Q9Y5U8 109 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 TACC2O95359 2948 aa9.25□□□□□ -0.93
SHMT2-218ENST00000555213 ARID1AO14497 2285 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 A0A1B0GWJ7 208 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 LRRC30A6NM36 301 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 F5H5P2 479 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 IFNL4K9M1U5 179 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 PDCD5O14737 125 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 MLNRO43193 412 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 LY6HO94772 140 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 FAHP16930 419 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 ZNF20P17024 532 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 CD200P41217 278 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 PLA2G7Q13093 441 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 PRDX4Q13162 271 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 DYNC1I2Q13409 638 aaKnown RBP9.24□□□□□ -0.93
SHMT2-218ENST00000555213 C1orf100Q5SVJ3 147 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 PEG10Q86TG7 708 aaKnown RBP9.24□□□□□ -0.93
SHMT2-218ENST00000555213 BIVMQ86UB2 503 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 CROCCP3Q8IVE0 287 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 LAX1Q8IWV1 398 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 OR52N4Q8NGI2 321 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 OR11L1Q8NGX0 322 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 THRSPQ92748 146 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 HPS1Q92902 700 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 C10orf35Q96D05 121 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 TIMD4Q96H15 378 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 MEGF10Q96KG7 1140 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 Q96MF0 132 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 WDFY2Q96P53 400 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 SDHCQ99643 169 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-218ENST00000555213 NKX3-1Q99801 234 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-218ENST00000555213 C6orf62Q9GZU0 229 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-218ENST00000555213 DAPK2Q9UIK4 370 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 PPP1R3CQ9UQK1 317 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 PEX16Q9Y5Y5 336 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 ARFGEF3Q5TH69 2177 aa9.24□□□□□ -0.93
SHMT2-218ENST00000555213 ZNF850A8MQ14 1090 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 CLDN25C9JDP6 229 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 AIPO00170 330 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 CDC14BO60729 498 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 HPGDSO60760 199 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms