RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 NDUFS8O00217 210 aa12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 TPD52L2O43399 206 aaKnown RBP12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 SULT1B1O43704 296 aa12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 GRPP07492 148 aa12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 CSF3P09919 207 aa12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 CD37P11049 281 aa12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 AZGP1P25311 298 aaKnown RBP12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 PSMB9P28065 219 aa12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 PDLIM4P50479 330 aa12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 TMEM33P57088 247 aa12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 DSCR9P59020 149 aa12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 MZT1Q08AG7 82 aa12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 SPNS3Q6ZMD2 512 aa12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 GCSAMQ8N6F7 178 aa12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 NPRL2Q8WTW4 380 aa12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 AQP3Q92482 292 aa12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 SPSB1Q96BD6 273 aa12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 NOX4Q9NPH5 578 aa12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 C1orf123Q9NWV4 160 aa12.48□□□□□ -0.41
MTHFD1-204ENST00000553405 A0A1W2PPK0 400 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 TRIM64BA6NI03 449 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 C3orf80F5H4A9 247 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 IFNL4K9M1U5 179 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 CCRL2O00421 344 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 CDIPTO14735 213 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 WNT9BO14905 357 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 RHBDL1O75783 438 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 FSTL3O95633 263 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 CYB5R3P00387 301 aaPredicted RBP12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 SERPINA3P01011 423 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 IGHV2-70P01814 119 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 CD2P06729 351 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 EGR1P18146 543 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 ADRA2CP18825 462 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 PSMA1P25786 263 aaKnown RBP12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 FUT6P51993 359 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 CNN3Q15417 329 aaKnown RBP12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 TRAM1Q15629 374 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 HFEQ30201 348 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 FAM201AQ5SY85 155 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 CLEC2AQ6UVW9 174 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 OR5D14Q8NGL3 314 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 TRMT10AQ8TBZ6 339 aaKnown RBP12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 FAM168AQ92567 244 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 CCL17Q92583 94 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 Q96MF0 132 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 BPESC1Q9GZL8 116 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 METTL17Q9H7H0 456 aaPredicted RBP12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 FN3KRPQ9HA64 309 aa12.47□□□□□ -0.41
MTHFD1-204ENST00000553405 MED13LQ71F56 2210 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 CR1P17927 2039 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 TRDV1A0A1B0GX56 115 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 SHISA3A0PJX4 238 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 SRRM5B3KS81 715 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 J3QT63 122 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 GABRPO00591 440 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 TNFRSF13BO14836 293 aaPredicted RBP12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 SYNGR1O43759 233 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 RGS9O75916 674 aaPredicted RBP12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 ALDOBP05062 364 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 TFAP2AP05549 437 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 ACAA1P09110 424 aaPredicted RBP12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 PRKACBP22694 351 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 NR4A2P43354 598 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 ALDH3B2P48448 385 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 ZP1P60852 638 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 ZMYND11Q15326 602 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 CEACAM19Q7Z692 300 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 LRRTM1Q86UE6 522 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 ANGPTL5Q86XS5 388 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 OR10Z1Q8NGY1 313 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 YIPF6Q96EC8 236 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 SPACA5Q96QH8 159 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 HIST1H2AAQ96QV6 131 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 GFI1Q99684 422 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 PKIBQ9C010 78 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 RNF7Q9UBF6 113 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 ITGB1BP2Q9UKP3 347 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 FOXJ3Q9UPW0 622 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 WIPI2Q9Y4P8 454 aa12.46□□□□□ -0.41
MTHFD1-204ENST00000553405 SVEP1Q4LDE5 3571 aa12.46□□□□□ -0.42
MTHFD1-204ENST00000553405 IGHV4-61A0A0C4DH41 118 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 FAM230AA0A1W2PPH8 454 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 CLDN25C9JDP6 229 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 F8VVB4 439 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 F8VWA3 439 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 NOS1APO75052 506 aaPredicted RBP12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 PGA5P0DJD9 388 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 RAB3AP20336 220 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 GALP22466 123 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 MAPK3P27361 379 aaPredicted RBP12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 HAAOP46952 286 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 RBP2P50120 134 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 ERVK11-1P61568 191 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 HAGHLQ6PII5 290 aaPredicted RBP12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 LHFPL2Q6ZUX7 228 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 ZNF573Q86YE8 665 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 OR52N4Q8NGI2 321 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 LRRC29Q8WV35 223 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 PHYHIPQ92561 330 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms