RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 KCNS2Q9ULS6 477 aa11.81□□□□□ -0.52
PTCH1-226ENST00000553011 PQLC2LA1A4F0 135 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 OOEPA6NGQ2 149 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 SRRM5B3KS81 715 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 MYL12BO14950 172 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 AKR7A2O43488 359 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 PLPP2O43688 288 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 FSTL3O95633 263 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 CDK1P06493 297 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 MSMBP08118 114 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 WNT2P09544 360 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 RPS2P15880 293 aaKnown RBP11.8□□□□□ -0.52
PTCH1-226ENST00000553011 ZNF20P17024 532 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 CFHR2P36980 270 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 CCDC58Q4VC31 144 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 HAGHLQ6PII5 290 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-226ENST00000553011 FAM90A1Q86YD7 464 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 ZFP41Q8N8Y5 198 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 OR13C3Q8NGS6 347 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 RPS4Y2Q8TD47 263 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 AQP3Q92482 292 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 RGP1Q92546 391 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-226ENST00000553011 C10orf35Q96D05 121 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 COMMD4Q9H0A8 199 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 WDR13Q9H1Z4 485 aa11.8□□□□□ -0.52
PTCH1-226ENST00000553011 TRAV38-1A0A0B4J264 116 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 IGKV1-9A0A0C4DH69 117 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 FAM230AA0A1W2PPH8 454 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 OGG1O15527 345 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 SYNGR1O43759 233 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 RRP9O43818 475 aaKnown RBP11.79□□□□□ -0.52
PTCH1-226ENST00000553011 GATBO75879 557 aaKnown RBP11.79□□□□□ -0.52
PTCH1-226ENST00000553011 SERPINA3P01011 423 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 GYPAP02724 150 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 ZFP36P26651 326 aaKnown RBP11.79□□□□□ -0.52
PTCH1-226ENST00000553011 HAAOP46952 286 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 DVL1P1P54792 670 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-226ENST00000553011 SLC35A2P78381 396 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 LCN2P80188 198 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 TEX36Q5VZQ5 186 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 DCDC5Q6ZRR9 648 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 GLCCI1Q86VQ1 547 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 NANOGP1Q8N7R0 232 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 OR10Z1Q8NGY1 313 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 OR51F2Q8NH61 342 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 PP6455Q8WZ26 134 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 MYDGFQ969H8 173 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 TMEM186Q96B77 213 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 ZNF184Q99676 751 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-226ENST00000553011 TRIM36Q9NQ86 728 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 HIF1ANQ9NWT6 349 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 MIOXQ9UGB7 285 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 SLC7A11Q9UPY5 501 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 TPRKBQ9Y3C4 175 aa11.79□□□□□ -0.52
PTCH1-226ENST00000553011 MXRA5Q9NR99 2828 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 IGKV1-27A0A075B6S5 117 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 KIAA1324LA8MWY0 1029 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-226ENST00000553011 J3QT63 122 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 TNFRSF13BO14836 293 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-226ENST00000553011 PHF1O43189 567 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-226ENST00000553011 MT-ND2P03891 347 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 SOX2P48431 317 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 WNT4P56705 351 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 CR1LQ2VPA4 569 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 DMKNQ6E0U4 476 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-226ENST00000553011 UTS2BQ765I0 119 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 ANGPTL5Q86XS5 388 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 ZNF573Q86YE8 665 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 CALHM1Q8IU99 346 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 OR8B3Q8NGG8 313 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 OR13C5Q8NGS8 318 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 OR13C9Q8NGT0 318 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 TSEN15Q8WW01 171 aaKnown RBP11.78□□□□□ -0.52
PTCH1-226ENST00000553011 SMIM19Q96E16 107 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 NEIL1Q96FI4 390 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-226ENST00000553011 ZNF488Q96MN9 340 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 OR8B2Q96RD0 313 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 CDCA4Q9BXL8 241 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 DUSP21Q9H596 190 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 SNTG1Q9NSN8 517 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 CTSZQ9UBR2 303 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 DHDHQ9UQ10 334 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 ERGIC3Q9Y282 383 aa11.78□□□□□ -0.52
PTCH1-226ENST00000553011 TRAV20A0A0B4J274 112 aa11.77□□□□□ -0.53
PTCH1-226ENST00000553011 PNMA8CA0A1B0GUJ8 204 aa11.77□□□□□ -0.53
PTCH1-226ENST00000553011 ADAM20O43506 726 aa11.77□□□□□ -0.53
PTCH1-226ENST00000553011 FOXH1O75593 365 aa11.77□□□□□ -0.53
PTCH1-226ENST00000553011 TFF1P04155 84 aa11.77□□□□□ -0.53
PTCH1-226ENST00000553011 RPSAP08865 295 aaKnown RBP11.77□□□□□ -0.53
PTCH1-226ENST00000553011 MUC1P15941 1255 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-226ENST00000553011 ATF1P18846 271 aa11.77□□□□□ -0.53
PTCH1-226ENST00000553011 CRHBPP24387 322 aa11.77□□□□□ -0.53
PTCH1-226ENST00000553011 PITPNBP48739 271 aa11.77□□□□□ -0.53
PTCH1-226ENST00000553011 FUT6P51993 359 aa11.77□□□□□ -0.53
PTCH1-226ENST00000553011 IRF3Q14653 427 aa11.77□□□□□ -0.53
PTCH1-226ENST00000553011 CNN3Q15417 329 aaKnown RBP11.77□□□□□ -0.53
PTCH1-226ENST00000553011 KCNJ8Q15842 424 aa11.77□□□□□ -0.53
PTCH1-226ENST00000553011 MICBQ29980 383 aa11.77□□□□□ -0.53
PTCH1-226ENST00000553011 ESCO2Q56NI9 601 aa11.77□□□□□ -0.53
PTCH1-226ENST00000553011 RNLSQ5VYX0 342 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms