RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 PAQR5Q9NXK6 330 aaPredicted RBP3.87□□□□□ -1.79
CPSF6-206ENST00000550987 ADAM22Q9P0K1 906 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 GOLT1BQ9Y3E0 138 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 MMP24Q9Y5R2 645 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 SLC25A15Q9Y619 301 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 USF3Q68DE3 2245 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 RP1P56715 2156 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 TRAV19A0A0A6YYK7 116 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 RAB19A4D1S5 217 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 MGAT4DA6NG13 374 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 C12orf77C9JDV5 145 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 HAT1O14929 419 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 DENRO43583 198 aaKnown RBP3.86□□□□□ -1.79
CPSF6-206ENST00000550987 EEDO75530 441 aaKnown RBP3.86□□□□□ -1.79
CPSF6-206ENST00000550987 EIF3GO75821 320 aaKnown RBP eCLIP3.86□□□□□ -1.79
CPSF6-206ENST00000550987 MMP23AO75900 390 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 TSPAN13O95857 204 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 ASS1P00966 412 aaKnown RBP3.86□□□□□ -1.79
CPSF6-206ENST00000550987 ALDOBP05062 364 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 OCMP0CE72 109 aaPredicted RBP3.86□□□□□ -1.79
CPSF6-206ENST00000550987 IL32P24001 234 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 ZBTB25P24278 435 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 STOMP27105 288 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 LCN1P31025 176 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 TNFSF9P41273 254 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 RPS5P46782 204 aaKnown RBP3.86□□□□□ -1.79
CPSF6-206ENST00000550987 SSR4P51571 173 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 SUB1P53999 127 aaKnown RBP eCLIP3.86□□□□□ -1.79
CPSF6-206ENST00000550987 ACTA2P62736 377 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 ACTG2P63267 376 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 ACTC1P68032 377 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 ACTA1P68133 377 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 SELENBP1Q13228 472 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 ORC2Q13416 577 aaPredicted RBP3.86□□□□□ -1.79
CPSF6-206ENST00000550987 CYTH1Q15438 398 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 NRF1Q16656 503 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 DEFB113Q30KQ7 82 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 PAGE3Q5JUK9 113 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 TTC33Q6PID6 262 aaPredicted RBP3.86□□□□□ -1.79
CPSF6-206ENST00000550987 CERS6Q6ZMG9 384 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 CMTM1Q8IZ96 169 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 PDIK1LQ8N165 341 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 PNKDQ8N490 385 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 C3orf56Q8N813 242 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 NKAPP1Q8N9T2 125 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 SPPL2BQ8TCT7 592 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 DCUN1D4Q92564 292 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 ARPC1AQ92747 370 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 C8orf44Q96CB5 159 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 ECHDC3Q96DC8 303 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 TMEM246Q9BRR3 403 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 TM6SF2Q9BZW4 377 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 DERL2Q9GZP9 239 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 RAB1BQ9H0U4 201 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 GOLPH3Q9H4A6 298 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 RPS10P5Q9NQ39 176 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 EURLQ9NYK6 297 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 IFNKQ9P0W0 207 aa3.86□□□□□ -1.79
CPSF6-206ENST00000550987 KIR2DL5BA0A0G2JN68 375 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 KIR2DL5BA0A0G2JPC4 375 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 ZFP92A6NM28 416 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 GOLGA8KD6RF30 607 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 GOLGA8RI6L899 631 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 BCKDKO14874 412 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 KDELR3O43731 214 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 NSA2O95478 260 aaKnown RBP3.85□□□□□ -1.79
CPSF6-206ENST00000550987 GIG44P09565 113 aaPredicted RBP3.85□□□□□ -1.79
CPSF6-206ENST00000550987 CXCL8P10145 99 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 BTCP35070 178 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 PCK1P35558 622 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 MRPL19P49406 292 aaKnown RBP3.85□□□□□ -1.79
CPSF6-206ENST00000550987 RORCP51449 518 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 MAGOHP61326 146 aaKnown RBP3.85□□□□□ -1.79
CPSF6-206ENST00000550987 ADARB1P78563 741 aaKnown RBP3.85□□□□□ -1.79
CPSF6-206ENST00000550987 PAX5Q02548 391 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 SMARCB1Q12824 385 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 PLEKHG7Q6ZR37 379 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 TMEM135Q86UB9 458 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 MYPOPQ86VE0 399 aaPredicted RBP3.85□□□□□ -1.79
CPSF6-206ENST00000550987 CYP4Z1Q86W10 505 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 THOC6Q86W42 341 aaKnown RBP3.85□□□□□ -1.79
CPSF6-206ENST00000550987 LRRC8AQ8IWT6 810 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 IQCKQ8N0W5 287 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 KIR2DL5AQ8N109 375 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 ST6GALNAC3Q8NDV1 305 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 CCDC112Q8NEF3 446 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 CCDC54Q8NEL0 328 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 OR1N2Q8NGR9 330 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 KIR2DL5BQ8NHK3 375 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 TEX47Q8TBZ9 253 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 MARCH1Q8TCQ1 289 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 C2orf15Q8WU43 125 aaKnown RBP3.85□□□□□ -1.79
CPSF6-206ENST00000550987 TMA16Q96EY4 203 aaKnown RBP3.85□□□□□ -1.79
CPSF6-206ENST00000550987 C8orf4Q9NR00 106 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 SLC7A10Q9NS82 523 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 HRASLS2Q9NWW9 162 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 MTCH1Q9NZJ7 389 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 ENPP5Q9UJA9 477 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 FLVCR2Q9UPI3 526 aa3.85□□□□□ -1.79
CPSF6-206ENST00000550987 RHBDD3Q9Y3P4 386 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms