RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 SLC7A11Q9UPY5 501 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 SIRT4Q9Y6E7 314 aaPredicted RBP11.49□□□□□ -0.57
TROAP-213ENST00000550709 DYSFO75923 2080 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 TRAV20A0A0B4J274 112 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 PQLC2LA1A4F0 135 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 TMEM212A6NML5 194 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 F5H0A9 414 aaPredicted RBP11.48□□□□□ -0.57
TROAP-213ENST00000550709 SLC1A7O00341 560 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 ADAM20O43506 726 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 CRLF1O75462 422 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 GATBO75879 557 aaKnown RBP11.48□□□□□ -0.57
TROAP-213ENST00000550709 HAAOP46952 286 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 PITPNBP48739 271 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 KCNJ8Q15842 424 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 MICBQ29980 383 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 FAM120AOSQ5T036 256 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 DCDC5Q6ZRR9 648 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 NLRC3Q7RTR2 1065 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 ANGPTL5Q86XS5 388 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 FAM90A1Q86YD7 464 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 ZNF573Q86YE8 665 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 BATF2Q8N1L9 274 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 ZFP41Q8N8Y5 198 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 OR8B3Q8NGG8 313 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 OR52N1Q8NH53 320 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 TSEN15Q8WW01 171 aaKnown RBP11.48□□□□□ -0.57
TROAP-213ENST00000550709 AQP3Q92482 292 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 NEIL1Q96FI4 390 aaPredicted RBP11.48□□□□□ -0.57
TROAP-213ENST00000550709 OR8B2Q96RD0 313 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 BEX2Q9BXY8 128 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 CHST5Q9GZS9 411 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 DNAJB11Q9UBS4 358 aa11.48□□□□□ -0.57
TROAP-213ENST00000550709 PNMA8CA0A1B0GUJ8 204 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.47□□□□□ -0.57
TROAP-213ENST00000550709 MYL12BO14950 172 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 SYNGR1O43759 233 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 FOXH1O75593 365 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 INMTO95050 263 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 FSTL3O95633 263 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 LALBAP00709 142 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 PLATP00750 562 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 TFF1P04155 84 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 OCM2P0CE71 109 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 OCMP0CE72 109 aaPredicted RBP11.47□□□□□ -0.57
TROAP-213ENST00000550709 HOXB4P17483 251 aaPredicted RBP11.47□□□□□ -0.57
TROAP-213ENST00000550709 CFHR2P36980 270 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 SOX2P48431 317 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 GNB2P62879 340 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 CDK5R1Q15078 307 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 CHRFAM7AQ494W8 412 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 RPL22L1Q6P5R6 122 aaKnown RBP11.47□□□□□ -0.57
TROAP-213ENST00000550709 OR10Z1Q8NGY1 313 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 ZNF671Q8TAW3 534 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 HAVCR2Q8TDQ0 301 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 PP6455Q8WZ26 134 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 ZNF488Q96MN9 340 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 CCL13Q99616 98 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 SSBP3Q9BWW4 388 aaPredicted RBP11.47□□□□□ -0.57
TROAP-213ENST00000550709 RASSF4Q9H2L5 321 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 FKBP14Q9NWM8 211 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 DHDHQ9UQ10 334 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 ERGIC3Q9Y282 383 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 PCDHGB5Q9Y5G0 923 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 NSD1Q96L73 2696 aaPredicted RBP11.47□□□□□ -0.57
TROAP-213ENST00000550709 ANK3Q12955 4377 aaKnown RBP11.47□□□□□ -0.57
TROAP-213ENST00000550709 C2CD3Q4AC94 2353 aa11.47□□□□□ -0.57
TROAP-213ENST00000550709 KIAA1324LA8MWY0 1029 aaPredicted RBP11.46□□□□□ -0.57
TROAP-213ENST00000550709 SRRM5B3KS81 715 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 J3QT63 122 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 CDK1P06493 297 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 MUC1P15941 1255 aaPredicted RBP11.46□□□□□ -0.57
TROAP-213ENST00000550709 ATF1P18846 271 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 PCMT1P22061 227 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 GLRA1P23415 457 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 RIPPLY3P57055 190 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 CCDC58Q4VC31 144 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 DCAF12L2Q5VW00 463 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 TEX36Q5VZQ5 186 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 ZNF485Q8NCK3 441 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 OR13C9Q8NGT0 318 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 RGP1Q92546 391 aaPredicted RBP11.46□□□□□ -0.57
TROAP-213ENST00000550709 MYDGFQ969H8 173 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 C10orf35Q96D05 121 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 TECTBQ96PL2 329 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 TRIM36Q9NQ86 728 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 MMP26Q9NRE1 261 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 PAK1IP1Q9NWT1 392 aaPredicted RBP11.46□□□□□ -0.57
TROAP-213ENST00000550709 CTSZQ9UBR2 303 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 CLN8Q9UBY8 286 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 OR5V1Q9UGF6 321 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 CDC42EP3Q9UKI2 254 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 LRCH1Q9Y2L9 728 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 TPRKBQ9Y3C4 175 aa11.46□□□□□ -0.57
TROAP-213ENST00000550709 NF1P21359 2839 aa11.46□□□□□ -0.58
TROAP-213ENST00000550709 NAV3Q8IVL0 2385 aa11.46□□□□□ -0.58
TROAP-213ENST00000550709 JMJD1CQ15652 2540 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 IGKV1-27A0A075B6S5 117 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 IGKV1-9A0A0C4DH69 117 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 A0A0G2JMP0 313 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 A0A0X1KG70 313 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms