RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 IRF3Q14653 427 aa18.86■□□□□ 0.61
BRF1-216ENST00000550208 ZNF404Q494X3 552 aa18.86■□□□□ 0.61
BRF1-216ENST00000550208 HAGHLQ6PII5 290 aaPredicted RBP18.86■□□□□ 0.61
BRF1-216ENST00000550208 OR10Z1Q8NGY1 313 aa18.86■□□□□ 0.61
BRF1-216ENST00000550208 PP6455Q8WZ26 134 aa18.86■□□□□ 0.61
BRF1-216ENST00000550208 SEH1LQ96EE3 360 aa18.86■□□□□ 0.61
BRF1-216ENST00000550208 Q9H521 79 aa18.86■□□□□ 0.61
BRF1-216ENST00000550208 LPAR2Q9HBW0 351 aa18.86■□□□□ 0.61
BRF1-216ENST00000550208 SLC7A11Q9UPY5 501 aa18.86■□□□□ 0.61
BRF1-216ENST00000550208 TLN2Q9Y4G6 2542 aa18.86■□□□□ 0.61
BRF1-216ENST00000550208 ABCA2Q9BZC7 2435 aa18.85■□□□□ 0.61
BRF1-216ENST00000550208 IGHV3OR15-7A0A075B7D8 119 aa18.85■□□□□ 0.61
BRF1-216ENST00000550208 IGKV1-9A0A0C4DH69 117 aa18.85■□□□□ 0.61
BRF1-216ENST00000550208 B4DSR2 109 aa18.85■□□□□ 0.61
BRF1-216ENST00000550208 RGS10O43665 173 aa18.85■□□□□ 0.61
BRF1-216ENST00000550208 GATBO75879 557 aaKnown RBP18.85■□□□□ 0.61
BRF1-216ENST00000550208 MT-ND2P03891 347 aa18.85■□□□□ 0.61
BRF1-216ENST00000550208 WNT2P09544 360 aa18.85■□□□□ 0.61
BRF1-216ENST00000550208 ATF1P18846 271 aa18.85■□□□□ 0.61
BRF1-216ENST00000550208 GMFBP60983 142 aa18.85■□□□□ 0.61
BRF1-216ENST00000550208 LYPD2Q6UXB3 125 aa18.85■□□□□ 0.61
BRF1-216ENST00000550208 ANGPTL5Q86XS5 388 aa18.85■□□□□ 0.61
BRF1-216ENST00000550208 AQP3Q92482 292 aa18.85■□□□□ 0.61
BRF1-216ENST00000550208 GHSRQ92847 366 aa18.85■□□□□ 0.61
BRF1-216ENST00000550208 DHDHQ9UQ10 334 aa18.85■□□□□ 0.61
BRF1-216ENST00000550208 MALRD1Q5VYJ5 2156 aa18.85■□□□□ 0.61
BRF1-216ENST00000550208 MTORP42345 2549 aa18.84■□□□□ 0.61
BRF1-216ENST00000550208 OOEPA6NGQ2 149 aa18.84■□□□□ 0.61
BRF1-216ENST00000550208 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.84■□□□□ 0.61
BRF1-216ENST00000550208 TNFRSF13BO14836 293 aaPredicted RBP18.84■□□□□ 0.61
BRF1-216ENST00000550208 AKR7A2O43488 359 aa18.84■□□□□ 0.61
BRF1-216ENST00000550208 HAAOP46952 286 aa18.84■□□□□ 0.61
BRF1-216ENST00000550208 SOX2P48431 317 aa18.84■□□□□ 0.61
BRF1-216ENST00000550208 FUT6P51993 359 aa18.84■□□□□ 0.61
BRF1-216ENST00000550208 UTS2BQ765I0 119 aa18.84■□□□□ 0.61
BRF1-216ENST00000550208 ZNF573Q86YE8 665 aa18.84■□□□□ 0.61
BRF1-216ENST00000550208 ZNF671Q8TAW3 534 aa18.84■□□□□ 0.61
BRF1-216ENST00000550208 TSEN15Q8WW01 171 aaKnown RBP18.84■□□□□ 0.61
BRF1-216ENST00000550208 SMIM19Q96E16 107 aa18.84■□□□□ 0.61
BRF1-216ENST00000550208 OR5M11Q96RB7 305 aa18.84■□□□□ 0.61
BRF1-216ENST00000550208 MND1Q9BWT6 205 aa18.84■□□□□ 0.61
BRF1-216ENST00000550208 CCDC90BQ9GZT6 254 aa18.84■□□□□ 0.61
BRF1-216ENST00000550208 WDR13Q9H1Z4 485 aa18.84■□□□□ 0.61
BRF1-216ENST00000550208 RASSF4Q9H2L5 321 aa18.84■□□□□ 0.61
BRF1-216ENST00000550208 ZNF281Q9Y2X9 895 aa18.84■□□□□ 0.61
BRF1-216ENST00000550208 LSM2Q9Y333 95 aaKnown RBP18.84■□□□□ 0.61
BRF1-216ENST00000550208 IGKV1-27A0A075B6S5 117 aa18.83■□□□□ 0.6
BRF1-216ENST00000550208 TRAV38-1A0A0B4J264 116 aa18.83■□□□□ 0.6
BRF1-216ENST00000550208 PNMA8CA0A1B0GUJ8 204 aa18.83■□□□□ 0.6
BRF1-216ENST00000550208 A8MV72 311 aaPredicted RBP18.83■□□□□ 0.6
BRF1-216ENST00000550208 SRRM5B3KS81 715 aa18.83■□□□□ 0.6
BRF1-216ENST00000550208 F5H0A9 414 aaPredicted RBP18.83■□□□□ 0.6
BRF1-216ENST00000550208 PLPP2O43688 288 aa18.83■□□□□ 0.6
BRF1-216ENST00000550208 SYNGR1O43759 233 aa18.83■□□□□ 0.6
BRF1-216ENST00000550208 SEC61A1P61619 476 aaKnown RBP18.83■□□□□ 0.6
BRF1-216ENST00000550208 TEX36Q5VZQ5 186 aa18.83■□□□□ 0.6
BRF1-216ENST00000550208 FAM166AQ6J272 317 aa18.83■□□□□ 0.6
BRF1-216ENST00000550208 FAM90A1Q86YD7 464 aa18.83■□□□□ 0.6
BRF1-216ENST00000550208 CALHM1Q8IU99 346 aa18.83■□□□□ 0.6
BRF1-216ENST00000550208 OR13C5Q8NGS8 318 aa18.83■□□□□ 0.6
BRF1-216ENST00000550208 GPR148Q8TDV2 347 aa18.83■□□□□ 0.6
BRF1-216ENST00000550208 TECTBQ96PL2 329 aa18.83■□□□□ 0.6
BRF1-216ENST00000550208 ZCCHC4Q9H5U6 513 aa18.83■□□□□ 0.6
BRF1-216ENST00000550208 MIOXQ9UGB7 285 aa18.83■□□□□ 0.6
BRF1-216ENST00000550208 INAFM1C9JVW0 142 aa18.82■□□□□ 0.6
BRF1-216ENST00000550208 GYPAP02724 150 aa18.82■□□□□ 0.6
BRF1-216ENST00000550208 MSMBP08118 114 aa18.82■□□□□ 0.6
BRF1-216ENST00000550208 CELP19835 753 aa18.82■□□□□ 0.6
BRF1-216ENST00000550208 ZFP36P26651 326 aaKnown RBP18.82■□□□□ 0.6
BRF1-216ENST00000550208 TAS2R43P59537 309 aa18.82■□□□□ 0.6
BRF1-216ENST00000550208 CNN3Q15417 329 aaKnown RBP18.82■□□□□ 0.6
BRF1-216ENST00000550208 DCDC5Q6ZRR9 648 aa18.82■□□□□ 0.6
BRF1-216ENST00000550208 PARP16Q8N5Y8 322 aa18.82■□□□□ 0.6
BRF1-216ENST00000550208 BORCS8Q96FH0 119 aa18.82■□□□□ 0.6
BRF1-216ENST00000550208 PGLYRP3Q96LB9 341 aa18.82■□□□□ 0.6
BRF1-216ENST00000550208 ZNF488Q96MN9 340 aa18.82■□□□□ 0.6
BRF1-216ENST00000550208 J3QT63 122 aa18.81■□□□□ 0.6
BRF1-216ENST00000550208 RPS2P15880 293 aaKnown RBP18.81■□□□□ 0.6
BRF1-216ENST00000550208 EEF1B2P24534 225 aaKnown RBP18.81■□□□□ 0.6
BRF1-216ENST00000550208 AZGP1P25311 298 aaKnown RBP18.81■□□□□ 0.6
BRF1-216ENST00000550208 MAP2K4P45985 399 aa18.81■□□□□ 0.6
BRF1-216ENST00000550208 RPS11P62280 158 aaKnown RBP eCLIP18.81■□□□□ 0.6
BRF1-216ENST00000550208 LCN2P80188 198 aa18.81■□□□□ 0.6
BRF1-216ENST00000550208 ACSM1Q08AH1 577 aa18.81■□□□□ 0.6
BRF1-216ENST00000550208 SPHARQ15513 63 aa18.81■□□□□ 0.6
BRF1-216ENST00000550208 PRSS48Q7RTY5 328 aa18.81■□□□□ 0.6
BRF1-216ENST00000550208 SERPINA12Q8IW75 414 aa18.81■□□□□ 0.6
BRF1-216ENST00000550208 DNAAF1Q8NEP3 725 aa18.81■□□□□ 0.6
BRF1-216ENST00000550208 OR5T2Q8NGG2 359 aa18.81■□□□□ 0.6
BRF1-216ENST00000550208 OR13C9Q8NGT0 318 aa18.81■□□□□ 0.6
BRF1-216ENST00000550208 OR51F2Q8NH61 342 aa18.81■□□□□ 0.6
BRF1-216ENST00000550208 NEIL1Q96FI4 390 aaPredicted RBP18.81■□□□□ 0.6
BRF1-216ENST00000550208 SNTG1Q9NSN8 517 aa18.81■□□□□ 0.6
BRF1-216ENST00000550208 ARHGAP32A7KAX9 2087 aa18.81■□□□□ 0.6
BRF1-216ENST00000550208 MUC1P15941 1255 aaPredicted RBP18.8■□□□□ 0.6
BRF1-216ENST00000550208 PRKACBP22694 351 aa18.8■□□□□ 0.6
BRF1-216ENST00000550208 GLRA1P23415 457 aa18.8■□□□□ 0.6
BRF1-216ENST00000550208 ATP1B3P54709 279 aa18.8■□□□□ 0.6
BRF1-216ENST00000550208 DVL1P1P54792 670 aaPredicted RBP18.8■□□□□ 0.6
BRF1-216ENST00000550208 MED22Q15528 200 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms