RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 EMC6Q9BV81 110 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 SAMD10Q9BYL1 202 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 COA1Q9GZY4 146 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 ZNF442Q9H7R0 627 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 METTL8Q9H825 291 aaKnown RBP1.87□□□□□ -2.11
CCDC38-208ENST00000549876 TMBIM4Q9HC24 238 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 ACOT13Q9NPJ3 140 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 SIRT7Q9NRC8 400 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 VAX2Q9UIW0 290 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 RAB23Q9ULC3 237 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 HES2Q9Y543 173 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 ATP6V1DQ9Y5K8 247 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 PLA2R1Q13018 1463 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 MN1Q10571 1320 aaPredicted RBP1.87□□□□□ -2.11
CCDC38-208ENST00000549876 IGLV1-50A0A075B6I6 118 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 FAM240AA0A1B0GVK7 77 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 F8VZ95 297 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 GOLGA8RI6L899 631 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 TNFRSF11BO00300 401 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 TOR1AO14656 332 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 ITGB1BP1O14713 200 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 MYL12BO14950 172 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 PSPHP1O15172 72 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 SLC25A14O95258 325 aaPredicted RBP1.86□□□□□ -2.11
CCDC38-208ENST00000549876 BCHEP06276 602 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 IGKV4-1P06312 121 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 GP1BAP07359 652 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 MMP7P09237 267 aaPredicted RBP1.86□□□□□ -2.11
CCDC38-208ENST00000549876 GIMD1P0DJR0 217 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 SYT1P21579 422 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 TEAD1P28347 426 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 KDELR2P33947 212 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 TALDO1P37837 337 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 MAGEA3P43357 314 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 MAGEA6P43360 314 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 ERFP50548 548 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 CDKN2DP55273 166 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 OR12D2P58182 307 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 TAS2R46P59540 309 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 SKP1P63208 163 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 STX4Q12846 297 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 TPBGQ13641 420 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 BSXQ3C1V8 233 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 CDNFQ49AH0 187 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 SYT6Q5T7P8 510 aaPredicted RBP1.86□□□□□ -2.11
CCDC38-208ENST00000549876 CEMP1Q6PRD7 247 aaPredicted RBP1.86□□□□□ -2.11
CCDC38-208ENST00000549876 Q6ZT83 130 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 FAM92BQ6ZTR7 304 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 AHSA2Q719I0 299 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 MRPL52Q86TS9 123 aaKnown RBP1.86□□□□□ -2.11
CCDC38-208ENST00000549876 LRRC6Q86X45 466 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 LRRC52Q8N7C0 313 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 ZNF738Q8NE65 137 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 OR51Q1Q8NH59 317 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 OR1S1Q8NH92 325 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 NT5CQ8TCD5 201 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 PIFOQ8TCI5 191 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 DDI1Q8WTU0 396 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 RXFP2Q8WXD0 754 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 IFT81Q8WYA0 676 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 ZNF514Q96K75 400 aaPredicted RBP1.86□□□□□ -2.11
CCDC38-208ENST00000549876 VAT1Q99536 393 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 TIMM17AQ99595 171 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 C20orf144Q9BQM9 153 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 ZNF251Q9BRH9 671 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 SRRQ9GZT4 340 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 RPP21Q9H633 154 aaKnown RBP1.86□□□□□ -2.11
CCDC38-208ENST00000549876 SLC40A1Q9NP59 571 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 PUS1Q9Y606 427 aaKnown RBP eCLIP1.86□□□□□ -2.11
CCDC38-208ENST00000549876 OTOGLQ3ZCN5 2332 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 PCM1Q15154 2024 aa1.86□□□□□ -2.11
CCDC38-208ENST00000549876 GPR179Q6PRD1 2367 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 SMIM26A0A096LP01 95 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 IGHV5-51A0A0C4DH38 117 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 ZNF233A6NK53 670 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 J3QT63 122 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 CRXO43186 299 aaPredicted RBP1.85□□□□□ -2.11
CCDC38-208ENST00000549876 NIPSNAP2O75323 286 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 TNFAIP8O95379 198 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 TRBV12-3P01733 135 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 OCMP0CE72 109 aaPredicted RBP1.85□□□□□ -2.11
CCDC38-208ENST00000549876 ZNF3P17036 446 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 DTYMKP23919 212 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 XKP51811 444 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 GFERP55789 205 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 RPL23P62829 140 aaKnown RBP1.85□□□□□ -2.11
CCDC38-208ENST00000549876 IFITM3Q01628 133 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 INCA1Q0VD86 236 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 MAPRE2Q15555 327 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 UBE2SQ16763 222 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 FBXW9Q5XUX1 488 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 NCCRP1Q6ZVX7 275 aaPredicted RBP1.85□□□□□ -2.11
CCDC38-208ENST00000549876 SSX7Q7RTT5 188 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 CRLF3Q8IUI8 442 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 LGI3Q8N145 548 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 SPICQ8N5J4 248 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 ATPAF2Q8N5M1 289 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 ACBD4Q8NC06 268 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 NECAP1Q8NC96 275 aa1.85□□□□□ -2.11
CCDC38-208ENST00000549876 UBA3Q8TBC4 463 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms