RNA–Protein interactions for RNA: ENST00000547148.5

PFKM-208, Transcript of phosphofructokinase, muscle, human

TSL 3

Gene PFKM, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-208	ENST00000547148	ZNF154	Q13106	437 aa		10.09	□□□□□ -0.79
PFKM-208	ENST00000547148	TESK1	Q15569	626 aa		10.09	□□□□□ -0.79
PFKM-208	ENST00000547148	KISS1	Q15726	138 aa		10.09	□□□□□ -0.79
PFKM-208	ENST00000547148	PRAMEF6	Q5VXH4	476 aa		10.09	□□□□□ -0.79
PFKM-208	ENST00000547148	FOXB2	Q5VYV0	432 aa		10.09	□□□□□ -0.79
PFKM-208	ENST00000547148	LHFPL2	Q6ZUX7	228 aa		10.09	□□□□□ -0.79
PFKM-208	ENST00000547148	CALHM1	Q8IU99	346 aa		10.09	□□□□□ -0.79
PFKM-208	ENST00000547148	C11orf53	Q8IXP5	236 aa		10.09	□□□□□ -0.79
PFKM-208	ENST00000547148	NDNF	Q8TB73	568 aa		10.09	□□□□□ -0.79
PFKM-208	ENST00000547148	ITLN1	Q8WWA0	313 aa		10.09	□□□□□ -0.79
PFKM-208	ENST00000547148	BORCS8	Q96FH0	119 aa		10.09	□□□□□ -0.79
PFKM-208	ENST00000547148	NKX3-1	Q99801	234 aa	Predicted RBP	10.09	□□□□□ -0.79
PFKM-208	ENST00000547148	SLITRK2	Q9H156	845 aa		10.09	□□□□□ -0.79
PFKM-208	ENST00000547148	OR51I2	Q9H344	312 aa		10.09	□□□□□ -0.79
PFKM-208	ENST00000547148	C14orf119	Q9NWQ9	140 aa		10.09	□□□□□ -0.79
PFKM-208	ENST00000547148	AK6	Q9Y3D8	172 aa	Known RBP	10.09	□□□□□ -0.79
PFKM-208	ENST00000547148	HIVEP1	P15822	2718 aa		10.09	□□□□□ -0.79
PFKM-208	ENST00000547148	APC	P25054	2843 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	CELSR1	Q9NYQ6	3014 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	IGHV3-64D	A0A0J9YX35	117 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	LRP5L	A4QPB2	252 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	MEGF11	A6BM72	1044 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148		A6NHS1	94 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	TRIM64B	A6NI03	449 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	ZNF701	M0R085	212 aa	Predicted RBP	10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	SLC22A1	O15245	554 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	CDRT1	O95170	752 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	HPX	P02790	462 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	CLEC2L	P0C7M8	214 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	OCM	P0CE72	109 aa	Predicted RBP	10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	ZNF93	P35789	620 aa	Predicted RBP	10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	SERPINB10	P48595	397 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	MTCP1	P56278	107 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	OR10A3	P58181	314 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	ZP1	P60852	638 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	CCL8	P80075	99 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	MZT1	Q08AG7	82 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	HNRNPA0	Q13151	305 aa	Known RBP	10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	MPPED2	Q15777	294 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	TPRA1	Q86W33	373 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	CDH26	Q8IXH8	852 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	VRK1	Q99986	396 aa	Predicted RBP	10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	RAB1B	Q9H0U4	201 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	CXorf56	Q9H5V9	222 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	METTL17	Q9H7H0	456 aa	Predicted RBP	10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	SAP30L	Q9HAJ7	183 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	NEK6	Q9HC98	313 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	RSL24D1	Q9UHA3	163 aa	Known RBP	10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	CSMD2	Q7Z408	3487 aa		10.08	□□□□□ -0.8
PFKM-208	ENST00000547148	ABCA2	Q9BZC7	2435 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	MTOR	P42345	2549 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	ARFGEF3	Q5TH69	2177 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	SMIM30	A4D0T7	59 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148		J3QT63	122 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	PDCD5	O14737	125 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	MAGEB3	O15480	346 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	NOL3	O60936	208 aa	Known RBP	10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	IL1A	P01583	271 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	GRP	P07492	148 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	PAX1	P15863	534 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	RAB3B	P20337	219 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	MPZ	P25189	248 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	CFP	P27918	469 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	RPS19	P39019	145 aa	Known RBP	10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	PMEL	P40967	661 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	HAAO	P46952	286 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	OR3A4P	P47883	348 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	ATP1B3	P54709	279 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	MXD1	Q05195	221 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	SPCS2	Q15005	226 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	GLT8D1	Q68CQ7	371 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	HAGHL	Q6PII5	290 aa	Predicted RBP	10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	USP43	Q70EL4	1123 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	ANGPTL5	Q86XS5	388 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	ZNF573	Q86YE8	665 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	SCCPDH	Q8NBX0	429 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	OR5D18	Q8NGL1	313 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148		Q8TCH9	128 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	RFT1	Q96AA3	541 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	C12orf43	Q96C57	262 aa	Known RBP	10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	CPNE2	Q96FN4	548 aa	Predicted RBP	10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	UQCC2	Q9BRT2	126 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	PKIB	Q9C010	78 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	EGLN1	Q9GZT9	426 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	DCSTAMP	Q9H295	470 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	GCM1	Q9NP62	436 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	DECR2	Q9NUI1	292 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	ZNF701	Q9NV72	531 aa	Predicted RBP	10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	NDUFA13	Q9P0J0	144 aa		10.07	□□□□□ -0.8
PFKM-208	ENST00000547148	CCDC160	A6NGH7	325 aa		10.06	□□□□□ -0.8
PFKM-208	ENST00000547148	AIP	O00170	330 aa		10.06	□□□□□ -0.8
PFKM-208	ENST00000547148	CDIPT	O14735	213 aa		10.06	□□□□□ -0.8
PFKM-208	ENST00000547148	SYNGR1	O43759	233 aa		10.06	□□□□□ -0.8
PFKM-208	ENST00000547148	NDUFS7	O75251	213 aa		10.06	□□□□□ -0.8
PFKM-208	ENST00000547148	RHBDL1	O75783	438 aa		10.06	□□□□□ -0.8
PFKM-208	ENST00000547148	IGHV4-39	P01824	125 aa		10.06	□□□□□ -0.8
PFKM-208	ENST00000547148	TNFRSF1A	P19438	455 aa		10.06	□□□□□ -0.8
PFKM-208	ENST00000547148	POU3F4	P49335	361 aa		10.06	□□□□□ -0.8
PFKM-208	ENST00000547148	CAV3	P56539	151 aa		10.06	□□□□□ -0.8
PFKM-208	ENST00000547148	PDZK1IP1	Q13113	114 aa		10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms