RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 HGFACQ04756 655 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 RBPJQ06330 500 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 FOXF2Q12947 444 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 RAB32Q13637 225 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 RIN1Q13671 783 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 OR8B8Q15620 311 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 HSD17B12Q53GQ0 312 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 TMEM42Q69YG0 159 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 ZNF585AQ6P3V2 769 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 STAC2Q6ZMT1 411 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 DOK3Q7L591 496 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 CEACAM19Q7Z692 300 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 LRRTM1Q86UE6 522 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 CCDC190Q86UF4 302 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.28□□□□□ -1.24
VPS29-203ENST00000546588 CCDC28AQ8IWP9 274 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 GCNT2Q8N0V5 402 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 LRRC18Q8N456 261 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 CPEB3Q8NE35 698 aaKnown RBP7.28□□□□□ -1.24
VPS29-203ENST00000546588 Q8NFD4 153 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 OR51A4Q8NGJ6 313 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 OR5M9Q8NGP3 310 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 OR10AC1Q8NH08 325 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 AP3S1Q92572 193 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 SPTSSAQ969W0 71 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 TMEM106AQ96A25 262 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 POM121L2Q96KW2 1035 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 GFI1Q99684 422 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 VKORC1Q9BQB6 163 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 OPA3Q9H6K4 179 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 NOX3Q9HBY0 568 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 NOX4Q9NPH5 578 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 ZNF275Q9NSD4 429 aaPredicted RBP7.28□□□□□ -1.24
VPS29-203ENST00000546588 ASF1BQ9NVP2 202 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 ZNF319Q9P2F9 582 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 ZDHHC8Q9ULC8 765 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 IGF2RP11717 2491 aa7.27□□□□□ -1.24
VPS29-203ENST00000546588 MYO7BQ6PIF6 2116 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 AIPO00170 330 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 PDCD5O14737 125 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 DHRS3O75911 302 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 KRT33AO76009 404 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 CD2P06729 351 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 ABOP16442 354 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 ADRA2CP18825 462 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 RAB3BP20337 219 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 TUBG1P23258 451 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 DDOSTP39656 456 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 CA7P43166 264 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 TPTEP56180 551 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 RAP2BP61225 183 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 PRR30Q53SZ7 412 aaPredicted RBP7.27□□□□□ -1.25
VPS29-203ENST00000546588 PABPC1L2AQ5JQF8 200 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 FAM27D1Q5T7N8 215 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 HES5Q5TA89 166 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 ZNF774Q6NX45 483 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 SFXN4Q6P4A7 337 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 RPRMLQ8N4K4 120 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 ZNF676Q8N7Q3 588 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 MCFD2Q8NI22 146 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 S100ZQ8WXG8 99 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 HTRA1Q92743 480 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 LYZL4Q96KX0 146 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 C20orf173Q96LM9 149 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 SPATA25Q9BR10 227 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 TUBG2Q9NRH3 451 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 CENPMQ9NSP4 180 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 ABRACLQ9P1F3 81 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 PROCRQ9UNN8 238 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 PEX16Q9Y5Y5 336 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 ITPR1Q14643 2758 aa7.27□□□□□ -1.25
VPS29-203ENST00000546588 LOC100509620A0A075B734 347 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 hCG_38984A0A1B0GV85 526 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 RAB19A4D1S5 217 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 A8MXE2 369 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 PYCARD-AS1I3L0S3 204 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 CASKO14936 926 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 XRCC2O43543 280 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 IGHV3-9P01782 118 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 ALDOBP05062 364 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 SERPINA5P05154 406 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 CBR1P16152 277 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 CD40LGP29965 261 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 ALDH3B1P43353 468 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 CAMLGP49069 296 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 CAPZA1P52907 286 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 CASP6P55212 293 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 GNG2P59768 71 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 HNRNPA0Q13151 305 aaKnown RBP7.26□□□□□ -1.25
VPS29-203ENST00000546588 TNK1Q13470 666 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 GSG1Q2KHT4 349 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 SNAI3Q3KNW1 292 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 FBXL19-AS1Q494R0 122 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 PRR31Q5SQ13 230 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 TIMM23BQ5SRD1 257 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 ATPAF1Q5TC12 328 aaPredicted RBP7.26□□□□□ -1.25
VPS29-203ENST00000546588 GFRALQ6UXV0 394 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 PGAP1Q75T13 922 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.26□□□□□ -1.25
VPS29-203ENST00000546588 SERPINA12Q8IW75 414 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms