RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 MAP1BP46821 2468 aaKnown RBP10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 IGHV1-18A0A0C4DH31 117 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 PQLC2LA1A4F0 135 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 TMEM8BA6NDV4 472 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 M0QYG6 137 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 MFNGO00587 321 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 ECDO95905 644 aaPredicted RBP10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 CST4P01036 141 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 SFTPBP07988 381 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 MELTFP08582 738 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 CECR9P0C854 216 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 UBBP0CG47 229 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 GTF2F2P13984 249 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 PTGER4P35408 488 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 FUT6P51993 359 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 SIGIRRQ6IA17 410 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 LHFPL2Q6ZUX7 228 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 TRAPPC6BQ86SZ2 158 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 LIX1LQ8IVB5 337 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 OR51T1Q8NGJ9 327 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 OR56B4Q8NH76 319 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 C15orf40Q8WUR7 153 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 CREB3L1Q96BA8 519 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 OR2J1Q9GZK6 312 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 CDH20Q9HBT6 801 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 MCUBQ9NWR8 336 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 NKIRAS2Q9NYR9 191 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 ZNF835Q9Y2P0 537 aa10.53□□□□□ -0.72
AP003559.1-201ENST00000540906 A0A0G2JNJ9 132 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 OR5H1A6NKK0 313 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 F8VVB4 439 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 F8VWA3 439 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 HTR3BO95264 441 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 CRHP06850 196 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 ZNF35P13682 527 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 HIST1H1DP16402 221 aaKnown RBP10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 HLA-DMAP28067 261 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 CALCRP30988 508 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 MPV17P39210 176 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 NPBWR2P48146 333 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 GPM6AP51674 278 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 UCNP55089 124 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 PPP1CBP62140 327 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 PDZK1IP1Q13113 114 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 ESPL1Q14674 2120 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 ZBTB37Q5TC79 503 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 OR52W1Q6IF63 320 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 RAB12Q6IQ22 244 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 BTN2A1Q7KYR7 527 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 SLC25A40Q8TBP6 338 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 S100PBPQ96BU1 408 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 Q96M66 194 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 TM2D1Q9BX74 207 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 TINAGL1Q9GZM7 467 aaPredicted RBP10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 Q9UFV3 132 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 POU2F3Q9UKI9 436 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 SLC25A15Q9Y619 301 aa10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 RP1L1Q8IWN7 2480 aaPredicted RBP10.52□□□□□ -0.73
AP003559.1-201ENST00000540906 A0A0A6YYJ9 748 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 CENPXA8MT69 81 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 SULT1C2O00338 296 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 ICMTO60725 284 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 IGLV1-44P01699 117 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 CSF1P09603 554 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 ZNF735P0CB33 412 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 GSTT2BP0CG30 244 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 HOXB1P14653 301 aaPredicted RBP10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 GABRR1P24046 479 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 ATP1B3P54709 279 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 P2RY6Q15077 328 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 PDCD1Q15116 288 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 SF3B4Q15427 424 aaKnown RBP eCLIP10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 PIGYQ3MUY2 71 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 BEND4Q6ZU67 534 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 CCDC36Q8IYA8 594 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 ZDHHC23Q8IYP9 409 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 RAB3CQ96E17 227 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 CST11Q9H112 138 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 C20orf85Q9H1P6 137 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 OR10A4Q9H209 315 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 SCPEP1Q9HB40 452 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 NPAP1Q9NZP6 1156 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 GHRLQ9UBU3 117 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 SLC7A11Q9UPY5 501 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 NUBP2Q9Y5Y2 271 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 ZNF732B4DXR9 585 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 SYNGR1O43759 233 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 CHRM2P08172 466 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 H2AFB2P0C5Z0 115 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 BMP5P22003 454 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 CA6P23280 308 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 BLVRBP30043 206 aaPredicted RBP10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 CCKARP32238 428 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 RANBP1P43487 201 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 UCP2P55851 309 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 AP3S2P59780 193 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 BTG1P62324 171 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 FAM27E3Q08E93 113 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 RSU1Q15404 277 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 MSMPQ1L6U9 139 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms