RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 NEK6Q9HC98 313 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 GPR173Q9NS66 373 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 NUDT15Q9NV35 164 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 COQ3Q9NZJ6 369 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 ALG5Q9Y673 324 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 C7orf66A4D0T2 115 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 NKX2-6A6NCS4 301 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 WIPF3A6NGB9 483 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 GMDSO60547 372 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 CDC14BO60729 498 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 SERPINA5P05154 406 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 AGAP20933 346 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 FAUP35544 74 aaKnown RBP10.74□□□□□ -0.69
SMAD3-204ENST00000540846 CCR6P51684 374 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 GSG1Q2KHT4 349 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 PCGF3Q3KNV8 242 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 BTN2A1Q7KYR7 527 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 CDH24Q86UP0 819 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 MYPOPQ86VE0 399 aaPredicted RBP10.74□□□□□ -0.69
SMAD3-204ENST00000540846 CCDC36Q8IYA8 594 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 PIGTQ969N2 578 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 APOBEC3DQ96AK3 386 aaPredicted RBP10.74□□□□□ -0.69
SMAD3-204ENST00000540846 S100PBPQ96BU1 408 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 TECTBQ96PL2 329 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 GAL3ST1Q99999 423 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 TMEM59Q9BXS4 323 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 CST11Q9H112 138 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 MRPL15Q9P015 296 aaKnown RBP10.74□□□□□ -0.69
SMAD3-204ENST00000540846 ZNF107Q9UII5 783 aaPredicted RBP10.74□□□□□ -0.69
SMAD3-204ENST00000540846 SLC25A15Q9Y619 301 aa10.74□□□□□ -0.69
SMAD3-204ENST00000540846 ANKHD1Q8IWZ3 2542 aaKnown RBP10.74□□□□□ -0.69
SMAD3-204ENST00000540846 ZNF816-ZNF321PA0A0X1KG74 233 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 A0A1W2PR80 420 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 FAM90A27PA6NNH2 459 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 PYCARD-AS1I3L0S3 204 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 CHRM2P08172 466 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 MELTFP08582 738 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 ZNF14P17017 642 aaPredicted RBP10.73□□□□□ -0.69
SMAD3-204ENST00000540846 GRNP28799 593 aaKnown RBP10.73□□□□□ -0.69
SMAD3-204ENST00000540846 ZP1P60852 638 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 ZNF260Q3ZCT1 412 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 TIMM23BQ5SRD1 257 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 TENM4Q6N022 2769 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 Q6ZTK2 550 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 MDP1Q86V88 176 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 OR10R2Q8NGX6 335 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 OR6F1Q8NGZ6 308 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 TNFAIP8L1Q8WVP5 186 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 REPIN1Q9BWE0 567 aaKnown RBP10.73□□□□□ -0.69
SMAD3-204ENST00000540846 ACTR6Q9GZN1 396 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 OR10A4Q9H209 315 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 OPA3Q9H6K4 179 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 OBP2BQ9NPH6 170 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 A0A0A6YYD4 124 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 TMEM235A6NFC5 223 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 C16orf97H3BN30 126 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 CCNKO75909 580 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 MPIG6BO95866 241 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 DHFRP00374 187 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 NRASP01111 189 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 IGKV3-15P01624 115 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 IGLV1-44P01699 117 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 RNF224P0DH78 156 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 CCL2P13500 99 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 IL32P24001 234 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 APLNRP35414 380 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 VEGFCP49767 419 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 RPS27AP62979 156 aaKnown RBP10.73□□□□□ -0.69
SMAD3-204ENST00000540846 SRSF1Q07955 248 aaKnown RBP eCLIP10.73□□□□□ -0.69
SMAD3-204ENST00000540846 MALLQ13021 153 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 GK2Q14410 553 aaPredicted RBP10.73□□□□□ -0.69
SMAD3-204ENST00000540846 LHFPL2Q6ZUX7 228 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 C1QL2Q7Z5L3 287 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 FAM89BQ8N5H3 189 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 STEAP2Q8NFT2 490 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 OR5D18Q8NGL1 313 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 OR56B4Q8NH76 319 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 RNASE6Q93091 150 aaKnown RBP10.73□□□□□ -0.69
SMAD3-204ENST00000540846 CMBLQ96DG6 245 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 MS4A3Q96HJ5 214 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 RNF170Q96K19 258 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 NICN1Q9BSH3 213 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 C20orf85Q9H1P6 137 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 KCNN3Q9UGI6 736 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 AMDHD2Q9Y303 409 aa10.73□□□□□ -0.69
SMAD3-204ENST00000540846 IGKV1-27A0A075B6S5 117 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 TRAV6A0A075B6T7 132 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 A0A1W2PP11 408 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 CRTAPO75718 401 aaPredicted RBP10.72□□□□□ -0.69
SMAD3-204ENST00000540846 THBDP07204 575 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 CELA3BP08861 270 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 GSTP1P09211 210 aaKnown RBP10.72□□□□□ -0.69
SMAD3-204ENST00000540846 H2AFB2P0C5Z0 115 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 AKAIN1P0CW23 69 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 GTF2F2P13984 249 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 CCNOP22674 350 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 PRSS12P56730 875 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 SLC22A6Q4U2R8 563 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 DMRTC1Q5HYR2 192 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 C1QTNF12Q5T7M4 302 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms