RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 NDUFA11Q86Y39 141 aa5.92□□□□□ -1.46
YBX3-209ENST00000540747 ZDHHC13Q8IUH4 622 aa5.92□□□□□ -1.46
YBX3-209ENST00000540747 CLVS1Q8IUQ0 354 aaPredicted RBP5.92□□□□□ -1.46
YBX3-209ENST00000540747 C11orf42Q8N5U0 333 aa5.92□□□□□ -1.46
YBX3-209ENST00000540747 CYB561A3Q8NBI2 242 aa5.92□□□□□ -1.46
YBX3-209ENST00000540747 OR2T6Q8NHC8 308 aa5.92□□□□□ -1.46
YBX3-209ENST00000540747 SGK3Q96BR1 496 aa5.92□□□□□ -1.46
YBX3-209ENST00000540747 NRBF2Q96F24 287 aa5.92□□□□□ -1.46
YBX3-209ENST00000540747 KCNJ15Q99712 375 aa5.92□□□□□ -1.46
YBX3-209ENST00000540747 NMNAT2Q9BZQ4 307 aa5.92□□□□□ -1.46
YBX3-209ENST00000540747 DNAJB9Q9UBS3 223 aa5.92□□□□□ -1.46
YBX3-209ENST00000540747 DNAJB11Q9UBS4 358 aa5.92□□□□□ -1.46
YBX3-209ENST00000540747 ORC6Q9Y5N6 252 aa5.92□□□□□ -1.46
YBX3-209ENST00000540747 V9GYQ6 96 aa5.92□□□□□ -1.46
YBX3-209ENST00000540747 DNAH1Q9P2D7 4330 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 IGKV1D-17A0A075B6S4 117 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 TRBV23-1A0A0A0MS06 115 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 TVP23AA6NH52 213 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 FAM90A8PA6NJQ4 464 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 ANKRD30BLA7E2S9 258 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 G3V2T6 193 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 CDIPTO14735 213 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 FBXO24O75426 580 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 DIRAS1O95057 198 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 CST1P01037 141 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 ACAA1P09110 424 aaPredicted RBP5.91□□□□□ -1.46
YBX3-209ENST00000540747 PAX6P26367 422 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 NAA10P41227 235 aaPredicted RBP5.91□□□□□ -1.46
YBX3-209ENST00000540747 GSK3AP49840 483 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 ALDH3A2P51648 485 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 PRKXP51817 358 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 ADARB1P78563 741 aaKnown RBP5.91□□□□□ -1.46
YBX3-209ENST00000540747 SPIBQ01892 262 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.91□□□□□ -1.46
YBX3-209ENST00000540747 LY6EQ16553 131 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 ZIK1Q3SY52 487 aaPredicted RBP5.91□□□□□ -1.46
YBX3-209ENST00000540747 CCBE1Q6UXH8 406 aaPredicted RBP5.91□□□□□ -1.46
YBX3-209ENST00000540747 DCXRQ7Z4W1 244 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 THAP5Q7Z6K1 395 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 LYG1Q8N1E2 194 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 OR4S1Q8NGB4 309 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 OR5T2Q8NGG2 359 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 OR51G2Q8NGK0 314 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 OR5D13Q8NGL4 314 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 OR4C15Q8NGM1 316 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 OR9Q1Q8NGQ5 310 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 OR8S1Q8NH09 359 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 OR52J3Q8NH60 311 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 OR5K1Q8NHB7 308 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 HPSE2Q8WWQ2 592 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 SLAMF6Q96DU3 332 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 RDH12Q96NR8 316 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 COPS4Q9BT78 406 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 IFT27Q9BW83 186 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 NPFFR1Q9GZQ6 430 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 FAM234AQ9H0X4 552 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 RBM38Q9H0Z9 239 aaKnown RBP5.91□□□□□ -1.46
YBX3-209ENST00000540747 RAB18Q9NP72 206 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 DCAF13Q9NV06 445 aaKnown RBP5.91□□□□□ -1.46
YBX3-209ENST00000540747 ZNF319Q9P2F9 582 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 SLC25A10Q9UBX3 287 aaPredicted RBP5.91□□□□□ -1.46
YBX3-209ENST00000540747 SF3B6Q9Y3B4 125 aaKnown RBP5.91□□□□□ -1.46
YBX3-209ENST00000540747 RHBDD3Q9Y3P4 386 aa5.91□□□□□ -1.46
YBX3-209ENST00000540747 HUWE1Q7Z6Z7 4374 aaKnown RBP5.9□□□□□ -1.46
YBX3-209ENST00000540747 A6NDX4 124 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 NKX6-3A6NJ46 265 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 TRIM64CA6NLI5 447 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 TMEM210A6NLX4 147 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 ZNF878C9JN71 531 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 ZNF701M0R085 212 aaPredicted RBP5.9□□□□□ -1.46
YBX3-209ENST00000540747 DLGAP1O14490 977 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 E2F6O75461 281 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 CST4P01036 141 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 HLA-DQA2P01906 255 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 VSIG10L2P0DP72 767 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 ZNF823P16415 610 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 ACKR3P25106 362 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 ENTPD1P49961 510 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 BMXP51813 675 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 EMX1Q04741 257 aaPredicted RBP5.9□□□□□ -1.46
YBX3-209ENST00000540747 TSPAN31Q12999 210 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 DCTN2Q13561 401 aaKnown RBP5.9□□□□□ -1.46
YBX3-209ENST00000540747 HABP2Q14520 560 aaPredicted RBP5.9□□□□□ -1.46
YBX3-209ENST00000540747 NSUN5P1Q3KNT7 163 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 RBM48Q5RL73 367 aaKnown RBP5.9□□□□□ -1.46
YBX3-209ENST00000540747 LDLRAD2Q5SZI1 272 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 SLC35F1Q5T1Q4 408 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 LINC01590Q5TEZ4 76 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 PGBD2Q6P3X8 592 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 KCTD8Q6ZWB6 473 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 CROCCP3Q8IVE0 287 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 C8orf59Q8N0T1 100 aaPredicted RBP5.9□□□□□ -1.46
YBX3-209ENST00000540747 DYNAPQ8N1N2 210 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 LNX2Q8N448 690 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 ZNF511Q8NB15 262 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 SLC37A3Q8NCC5 494 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 CSNK2A3Q8NEV1 391 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 OR4F17Q8NGA8 305 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 OR8D4Q8NGM9 314 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 OR2T4Q8NH00 348 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms