RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 DHHO43323 396 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 KCNAB3O43448 404 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 IGKV1D-16P01601 117 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 NMBP08949 121 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 OR8U8P0C7N1 319 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 AQP1P29972 269 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 CDKN2CP42773 168 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 RRAS2P62070 204 aaPredicted RBP6.52□□□□□ -1.37
GNE-205ENST00000539815 LSM6P62312 80 aaKnown RBP6.52□□□□□ -1.37
GNE-205ENST00000539815 HBA1P69905 142 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 SLC9A3R2Q15599 337 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 EFNB3Q15768 340 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 MAPK14Q16539 360 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 LEG1Q6P5S2 330 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 B3GLCTQ6Y288 498 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 SLC35D2Q76EJ3 337 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 C1QL4Q86Z23 238 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 SPAG16Q8N0X2 631 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 STX19Q8N4C7 294 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 KRTCAP2Q8N6L1 136 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 KIR3DL3Q8N743 410 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 ZNF582Q96NG8 517 aaPredicted RBP6.52□□□□□ -1.37
GNE-205ENST00000539815 SORT1Q99523 831 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 MCHR1Q99705 422 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 WIPI2Q9Y4P8 454 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 KIAA1549Q9HCM3 1950 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 AQP7P3A6NL99 342 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 UPK3AO75631 287 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 PMP2P02689 132 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 GRK5P34947 590 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 DAP3P51398 398 aaKnown RBP6.52□□□□□ -1.37
GNE-205ENST00000539815 CLDN8P56748 225 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 CXCR4P61073 352 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 UBA52P62987 128 aaKnown RBP6.52□□□□□ -1.37
GNE-205ENST00000539815 CDK6Q00534 326 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 EMX2Q04743 252 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 SCGB2B2Q4G0G5 96 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 RBM48Q5RL73 367 aaKnown RBP6.52□□□□□ -1.37
GNE-205ENST00000539815 ULK3Q6PHR2 472 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 DNM1P34Q6PK57 102 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 C22orf34Q6ZV56 151 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 TRIM46Q7Z4K8 759 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 PACRGLQ8N7B6 248 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 FAM86B1Q8N7N1 296 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 OR8S1Q8NH09 359 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 SMPD3Q9NY59 655 aaPredicted RBP6.52□□□□□ -1.37
GNE-205ENST00000539815 KCNG2Q9UJ96 466 aa6.52□□□□□ -1.37
GNE-205ENST00000539815 ZFHX4Q86UP3 3567 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 TRAV40A0A0B4J280 105 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 XKRY2A2RUG3 117 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 GGT3PA6NGU5 568 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 PIN1P1O15428 100 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 PLPP2O43688 288 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 SERPINE1P05121 402 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 ITGA5P08648 1049 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 IDH3AP50213 366 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 HTD2P86397 168 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 PDLIM3Q53GG5 364 aaPredicted RBP6.51□□□□□ -1.37
GNE-205ENST00000539815 SPANXN4Q5MJ08 99 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 BAIAP2L2Q6UXY1 529 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 ZNF620Q6ZNG0 422 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 PGAP1Q75T13 922 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 PUSL1Q8N0Z8 303 aaKnown RBP6.51□□□□□ -1.37
GNE-205ENST00000539815 ZNF454Q8N9F8 522 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 OR51G2Q8NGK0 314 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 OR5J2Q8NH18 312 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 MZB1Q8WU39 189 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 YIPF6Q96EC8 236 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 CCDC115Q96NT0 180 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 TXN2Q99757 166 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 YTHDF1Q9BYJ9 559 aaKnown RBP6.51□□□□□ -1.37
GNE-205ENST00000539815 ZNF436Q9C0F3 470 aaPredicted RBP6.51□□□□□ -1.37
GNE-205ENST00000539815 SSU72Q9NP77 194 aaKnown RBP6.51□□□□□ -1.37
GNE-205ENST00000539815 EML6Q6ZMW3 1958 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 IGKV3D-15A0A087WSY6 115 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 A0A0G2JK05 382 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 A0A1W2PPQ1 181 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 TMEM72A0PK05 275 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 CLPSP04118 112 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 PAX6P26367 422 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 GABRA5P31644 462 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 GAS1P54826 345 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 SLC17A1Q14916 467 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 SLC35F1Q5T1Q4 408 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 UNQ9370/PRO34162Q6UXP9 181 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 MRPL21Q7Z2W9 205 aaKnown RBP6.51□□□□□ -1.37
GNE-205ENST00000539815 SMIM15Q7Z3B0 74 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 OR2T4Q8NH00 348 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 TCTEX1D2Q8WW35 142 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 RORBQ92753 470 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 PNPOQ9NVS9 261 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 ING4Q9UNL4 249 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 RNF114Q9Y508 228 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 PUS1Q9Y606 427 aaKnown RBP eCLIP6.51□□□□□ -1.37
GNE-205ENST00000539815 UBDO15205 165 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 TMPRSS2O15393 492 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 ENSAO43768 121 aaKnown RBP6.51□□□□□ -1.37
GNE-205ENST00000539815 CH25HO95992 272 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 HKR1P10072 659 aa6.51□□□□□ -1.37
GNE-205ENST00000539815 ZNF44P15621 663 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms