RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	LUZP6	Q538Z0	58 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	TTC32	Q5I0X7	151 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	KHDRBS2	Q5VWX1	349 aa	Known RBP	3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	SLC25A34	Q6PIV7	304 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	HMGN2P46	Q86SG4	172 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	ZNF101	Q8IZC7	436 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	CA13	Q8N1Q1	262 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	ZCCHC24	Q8N2G6	241 aa	Known RBP	3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	SYS1	Q8N2H4	156 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	RNF182	Q8N6D2	247 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	OR5M1	Q8NGP8	315 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	NT5C	Q8TCD5	201 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	HGD	Q93099	445 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	COPS4	Q9BT78	406 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	TBL1XR1	Q9BZK7	514 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	SYT4	Q9H2B2	425 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	CSNK1G1	Q9HCP0	422 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	SDHAF2	Q9NX18	166 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	STMN3	Q9NZ72	180 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	ZNF229	Q9UJW7	825 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	RBMX2	Q9Y388	322 aa	Known RBP	3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	WIF1	Q9Y5W5	379 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	AHDC1	Q5TGY3	1603 aa	Predicted RBP	3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	YEATS2	Q9ULM3	1422 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	IGHV6-1	A0A0B4J1U7	121 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710		A0A0G2JMP0	313 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	LOC100506127	A0A0U1RQW1	187 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710		A0A0X1KG70	313 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	RPL36A-HNRNPH2	H7BZ11	118 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	SC5D	O75845	299 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	MAS1	P04201	325 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	CD28	P10747	220 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	BGN	P21810	368 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	MAD2L1BP	Q15013	274 aa	Predicted RBP	3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	PMVK	Q15126	192 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	MAPRE2	Q15555	327 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710		Q3ZCU0	254 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	CDNF	Q49AH0	187 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	FBXO48	Q5FWF7	155 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	RBM45	Q8IUH3	476 aa	Known RBP	3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	ST13P4	Q8IZP2	240 aa	Predicted RBP	3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	SLC25A29	Q8N8R3	303 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	OR4D6	Q8NGJ1	314 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	OR6K2	Q8NGY2	324 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	SMARCD1	Q96GM5	515 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	TMED9	Q9BVK6	235 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	SLC7A11	Q9UPY5	501 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	AP3M1	Q9Y2T2	418 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710		S4R3C0	116 aa		3.12	□□□□□ -1.91
PRKDC-208	ENST00000536710	NPHP4	O75161	1426 aa	Predicted RBP	3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	ARID1A	O14497	2285 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710		M0R1B8	84 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	RNF113A	O15541	343 aa	Known RBP	3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	CDRT1	O95170	752 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	VAPB	O95292	243 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	RANBP1	P43487	201 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	LY6E	Q16553	131 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	FAM222A	Q5U5X8	452 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	DEGS2	Q6QHC5	323 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	PDPN	Q86YL7	162 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	ORMDL3	Q8N138	153 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	ZNF561	Q8N587	486 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	ATPAF2	Q8N5M1	289 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	RMI2	Q96E14	147 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	ADTRP	Q96IZ2	230 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	CFAP53	Q96M91	514 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	ZNF2	Q9BSG1	426 aa	Predicted RBP	3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	ULBP2	Q9BZM5	246 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	SLC38A1	Q9H2H9	487 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	PLEKHF2	Q9H8W4	249 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	VAPA	Q9P0L0	249 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	RAB22A	Q9UL26	194 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710	JCAD	Q9P266	1359 aa		3.11	□□□□□ -1.91
PRKDC-208	ENST00000536710		A0A1W2PQ67	120 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	MGAT4D	A6NG13	374 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	CEACAM18	A8MTB9	384 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710		A8MWL6	223 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	FAM25E	A8MYX2	175 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	LGALS9	O00182	355 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	RTL8C	O15255	209 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	APOA1	P02647	267 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	HLA-G	P17693	338 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	GPR4	P46093	362 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	FUT5	Q11128	374 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	STX4	Q12846	297 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	BTN1A1	Q13410	526 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	SYT6	Q5T7P8	510 aa	Predicted RBP	3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	SETD3	Q86TU7	594 aa	Predicted RBP	3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	STK40	Q8N2I9	435 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	DOK4	Q8TEW6	326 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	WDR34	Q96EX3	536 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	OR2M4	Q96R27	311 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	CIB1	Q99828	191 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	MRPL20	Q9BYC9	149 aa	Known RBP	3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	RAB1B	Q9H0U4	201 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	PORCN	Q9H237	461 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	DDIT4	Q9NX09	232 aa		3.1	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms