RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 STK16O75716 305 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 AQP8O94778 261 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 LRATO95237 230 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 DIRAS3O95661 229 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 TTC4O95801 387 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 IFNB1P01574 187 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 PPIAL4FP0DN26 164 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 MLNP12872 115 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 HPGDP15428 266 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 CSNK2A2P19784 350 aaPredicted RBP2.42□□□□□ -2.02
SNHG1-202ENST00000535689 PGCP20142 388 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 AGTR1P30556 359 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 LCN1P31025 176 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 MPIP34949 423 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 KIR2DS2P43631 304 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 RPL29P47914 159 aaKnown RBP2.42□□□□□ -2.02
SNHG1-202ENST00000535689 CXCL6P80162 114 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 MRPS11P82912 194 aaKnown RBP2.42□□□□□ -2.02
SNHG1-202ENST00000535689 TNFRSF17Q02223 184 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 IRF8Q02556 426 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 LRRC36Q1X8D7 754 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 KHDRBS2Q5VWX1 349 aaKnown RBP2.42□□□□□ -2.02
SNHG1-202ENST00000535689 FBXW9Q5XUX1 488 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 OR52E8Q6IFG1 317 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 FAM45BPQ6NSW5 357 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 CGB2Q6NT52 195 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 MED27Q6P2C8 311 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 CES3Q6UWW8 571 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 MBOAT1Q6ZNC8 495 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 LHFPL4Q7Z7J7 247 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 NRMQ8IXM6 262 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 CPNE9Q8IYJ1 553 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 UBE2J2Q8N2K1 259 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 MMGT1Q8N4V1 131 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 ZNF433Q8N7K0 673 aaPredicted RBP2.42□□□□□ -2.02
SNHG1-202ENST00000535689 ZDHHC22Q8N966 263 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 OR2M3Q8NG83 312 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 OR10D3Q8NH80 312 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 OR2V1Q8NHB1 315 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 TRMT10AQ8TBZ6 339 aaKnown RBP2.42□□□□□ -2.02
SNHG1-202ENST00000535689 FAM45AQ8TCE6 357 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 PNPT1Q8TCS8 783 aaKnown RBP2.42□□□□□ -2.02
SNHG1-202ENST00000535689 CD200R1Q8TD46 325 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 RDH5Q92781 318 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 TMIGD2Q96BF3 282 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 RAB3CQ96E17 227 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 ZHX1-C8orf76Q96EF9 292 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 TIMD4Q96H15 378 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 TSNARE1Q96NA8 513 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 ZNF317Q96PQ6 595 aaPredicted RBP2.42□□□□□ -2.02
SNHG1-202ENST00000535689 OR4K3Q96R72 315 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 TBL1XR1Q9BZK7 514 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 NXF5Q9H1B4 397 aaKnown RBP2.42□□□□□ -2.02
SNHG1-202ENST00000535689 Q9H3A6 140 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 CENPHQ9H3R5 247 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 COQ10BQ9H8M1 238 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 ZNF446Q9NWS9 450 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 LAMP5Q9UJQ1 280 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 NUP50Q9UKX7 468 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 COPS3Q9UNS2 423 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 PPIAL4AQ9Y536 164 aa2.42□□□□□ -2.02
SNHG1-202ENST00000535689 TENM3Q9P273 2699 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 COL7A1Q02388 2944 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 SRRM5B3KS81 715 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 H0YC42 278 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 H3BNH8 94 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 CXCL13O43927 109 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 MRPL33O75394 65 aaKnown RBP2.41□□□□□ -2.02
SNHG1-202ENST00000535689 FOXH1O75593 365 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 LYZL6O75951 148 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 MPZL1O95297 269 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 SEMG1P04279 462 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 ZCCHC18P0CG32 403 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 CPMP14384 443 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 FUT1P19526 365 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 NPR2P20594 1047 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 PTNP21246 168 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 ELK4P28324 431 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 EVI2BP34910 448 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 PTGDSP41222 190 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 ZNF83P51522 516 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 WNT4P56705 351 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 BASP1P80723 227 aaKnown RBP2.41□□□□□ -2.02
SNHG1-202ENST00000535689 EMX1Q04741 257 aaPredicted RBP2.41□□□□□ -2.02
SNHG1-202ENST00000535689 CHIT1Q13231 466 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 ARL6IP1Q15041 203 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 PDK3Q15120 406 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 VPS26BQ4G0F5 336 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 OR2B11Q5JQS5 317 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 SPATA46Q5T0L3 261 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 ATAD3BQ5T9A4 648 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 TMEM225Q6GV28 225 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 DPY19L4Q7Z388 723 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 MTERF4Q7Z6M4 381 aaKnown RBP2.41□□□□□ -2.02
SNHG1-202ENST00000535689 TMEM179BQ7Z7N9 219 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 GALNT10Q86SR1 603 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 GTPBP8Q8N3Z3 284 aaPredicted RBP2.41□□□□□ -2.02
SNHG1-202ENST00000535689 RAB1CQ92928 201 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 TMBIM1Q969X1 311 aa2.41□□□□□ -2.02
SNHG1-202ENST00000535689 EFHD2Q96C19 240 aaPredicted RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms