RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 IGKV1-27A0A075B6S5 117 aa13.17□□□□□ -0.3
CNN1-202ENST00000535659 IGHV1-69-2A0A0G2JMI3 117 aa13.17□□□□□ -0.3
CNN1-202ENST00000535659 LOC100506127A0A0U1RQW1 187 aa13.17□□□□□ -0.3
CNN1-202ENST00000535659 LRP5LA4QPB2 252 aa13.17□□□□□ -0.3
CNN1-202ENST00000535659 CDC14BO60729 498 aa13.17□□□□□ -0.3
CNN1-202ENST00000535659 LY6HO94772 140 aa13.17□□□□□ -0.3
CNN1-202ENST00000535659 IGHV4-39P01824 125 aa13.17□□□□□ -0.3
CNN1-202ENST00000535659 DAOP14920 347 aa13.17□□□□□ -0.3
CNN1-202ENST00000535659 ZNF154Q13106 437 aa13.17□□□□□ -0.3
CNN1-202ENST00000535659 CDH24Q86UP0 819 aa13.17□□□□□ -0.3
CNN1-202ENST00000535659 MOGAT3Q86VF5 341 aa13.17□□□□□ -0.3
CNN1-202ENST00000535659 ANGPTL5Q86XS5 388 aa13.17□□□□□ -0.3
CNN1-202ENST00000535659 SCCPDHQ8NBX0 429 aa13.17□□□□□ -0.3
CNN1-202ENST00000535659 OR52N4Q8NGI2 321 aa13.17□□□□□ -0.3
CNN1-202ENST00000535659 RPL3LQ92901 407 aaKnown RBP13.17□□□□□ -0.3
CNN1-202ENST00000535659 TLNRD1Q9H1K6 362 aa13.17□□□□□ -0.3
CNN1-202ENST00000535659 FN3KRPQ9HA64 309 aa13.17□□□□□ -0.3
CNN1-202ENST00000535659 USF3Q68DE3 2245 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 TRAV1-2A0A0B4J238 106 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 TRIM64BA6NI03 449 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 CDIPTO14735 213 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 PMELP40967 661 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 HAAOP46952 286 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 KISS1Q15726 138 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 GPR107Q5VW38 600 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 LRRTM1Q86UE6 522 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 SATL1Q86VE3 508 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 ANKRD13BQ86YJ7 626 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 CDH26Q8IXH8 852 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 LRRC75A-AS1Q8N1F1 130 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 CCL17Q92583 94 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 PERPQ96FX8 193 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 KCTD7Q96MP8 289 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 SPACA5Q96QH8 159 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 CENPOQ9BU64 300 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 DLL4Q9NR61 685 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 C1orf123Q9NWV4 160 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 TREM2Q9NZC2 230 aa13.16□□□□□ -0.3
CNN1-202ENST00000535659 A6NLC8 198 aa13.15□□□□□ -0.3
CNN1-202ENST00000535659 LYNX1G3V0Z9 82 aa13.15□□□□□ -0.3
CNN1-202ENST00000535659 IFNL4K9M1U5 179 aa13.15□□□□□ -0.3
CNN1-202ENST00000535659 SSX4O60224 188 aa13.15□□□□□ -0.3
CNN1-202ENST00000535659 LYNX1P0DP58 116 aa13.15□□□□□ -0.3
CNN1-202ENST00000535659 ADRA2CP18825 462 aa13.15□□□□□ -0.3
CNN1-202ENST00000535659 HFEQ30201 348 aa13.15□□□□□ -0.3
CNN1-202ENST00000535659 DDI2Q5TDH0 399 aa13.15□□□□□ -0.3
CNN1-202ENST00000535659 HAGHLQ6PII5 290 aaPredicted RBP13.15□□□□□ -0.3
CNN1-202ENST00000535659 ZNF826PQ6ZT77 177 aa13.15□□□□□ -0.3
CNN1-202ENST00000535659 RNF144BQ7Z419 303 aa13.15□□□□□ -0.3
CNN1-202ENST00000535659 CALHM1Q8IU99 346 aa13.15□□□□□ -0.3
CNN1-202ENST00000535659 ZNF420Q8TAQ5 688 aaPredicted RBP13.15□□□□□ -0.3
CNN1-202ENST00000535659 Q8TCH9 128 aa13.15□□□□□ -0.3
CNN1-202ENST00000535659 AQP3Q92482 292 aa13.15□□□□□ -0.3
CNN1-202ENST00000535659 YIPF5Q969M3 257 aa13.15□□□□□ -0.3
CNN1-202ENST00000535659 CPNE2Q96FN4 548 aaPredicted RBP13.15□□□□□ -0.3
CNN1-202ENST00000535659 RNF167Q9H6Y7 350 aa13.15□□□□□ -0.3
CNN1-202ENST00000535659 CACNG2Q9Y698 323 aa13.15□□□□□ -0.3
CNN1-202ENST00000535659 CD37P11049 281 aa13.14□□□□□ -0.31
CNN1-202ENST00000535659 MYL9P24844 172 aa13.14□□□□□ -0.31
CNN1-202ENST00000535659 ZNF93P35789 620 aaPredicted RBP13.14□□□□□ -0.31
CNN1-202ENST00000535659 LSM3P62310 102 aaKnown RBP13.14□□□□□ -0.31
CNN1-202ENST00000535659 BLMHQ13867 455 aa13.14□□□□□ -0.31
CNN1-202ENST00000535659 ZNF181Q2M3W8 571 aa13.14□□□□□ -0.31
CNN1-202ENST00000535659 CRIP3Q6Q6R5 217 aa13.14□□□□□ -0.31
CNN1-202ENST00000535659 TGIF2LYQ8IUE0 185 aa13.14□□□□□ -0.31
CNN1-202ENST00000535659 CLVS1Q8IUQ0 354 aaPredicted RBP13.14□□□□□ -0.31
CNN1-202ENST00000535659 NKAIN3Q8N8D7 197 aa13.14□□□□□ -0.31
CNN1-202ENST00000535659 OR11L1Q8NGX0 322 aa13.14□□□□□ -0.31
CNN1-202ENST00000535659 ZNF671Q8TAW3 534 aa13.14□□□□□ -0.31
CNN1-202ENST00000535659 FOXRED1Q96CU9 486 aaPredicted RBP13.14□□□□□ -0.31
CNN1-202ENST00000535659 GPER1Q99527 375 aa13.14□□□□□ -0.31
CNN1-202ENST00000535659 PKIBQ9C010 78 aa13.14□□□□□ -0.31
CNN1-202ENST00000535659 NAA50Q9GZZ1 169 aaKnown RBP13.14□□□□□ -0.31
CNN1-202ENST00000535659 MYOZ1Q9NP98 299 aaPredicted RBP13.14□□□□□ -0.31
CNN1-202ENST00000535659 RNF7Q9UBF6 113 aa13.14□□□□□ -0.31
CNN1-202ENST00000535659 SHISA3A0PJX4 238 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 LRRC30A6NM36 301 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 J3QT63 122 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 PDCD5O14737 125 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 RP2O75695 350 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 IRF2P14316 349 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 MPZP25189 248 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 CFHR2P36980 270 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 MTNR1BP49286 362 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 PSMD7P51665 324 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 PDZK1IP1Q13113 114 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 GLT8D1Q68CQ7 371 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 WDR82Q6UXN9 313 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 SLC16A12Q6ZSM3 486 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 TPRA1Q86W33 373 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 LYPD6Q86Y78 171 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 HPS1Q92902 700 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 RFT1Q96AA3 541 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 TMEM106BQ9NUM4 274 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 AK6Q9Y3D8 172 aaKnown RBP13.13□□□□□ -0.31
CNN1-202ENST00000535659 PDZD2O15018 2839 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 AKAP9Q99996 3911 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 hCG_1807616A0A1W2PRN6 198 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 SYNGR1O43759 233 aa13.13□□□□□ -0.31
CNN1-202ENST00000535659 RHBDL1O75783 438 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms