RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 KCNJ8Q15842 424 aa17.23■□□□□ 0.35
CHFR-209ENST00000535181 SERPINA12Q8IW75 414 aa17.23■□□□□ 0.35
CHFR-209ENST00000535181 LRRC29Q8WV35 223 aa17.23■□□□□ 0.35
CHFR-209ENST00000535181 TSEN15Q8WW01 171 aaKnown RBP17.23■□□□□ 0.35
CHFR-209ENST00000535181 SPSB1Q96BD6 273 aa17.23■□□□□ 0.35
CHFR-209ENST00000535181 OR5M11Q96RB7 305 aa17.23■□□□□ 0.35
CHFR-209ENST00000535181 NARFLQ9H6Q4 476 aa17.23■□□□□ 0.35
CHFR-209ENST00000535181 ISYNA1Q9NPH2 558 aa17.23■□□□□ 0.35
CHFR-209ENST00000535181 ABCA1O95477 2261 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 TRBV5-5A0A0J9YX44 114 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 LGALS8O00214 317 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 CD5LO43866 347 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 LY6G6DO95868 133 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 CD2P06729 351 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 ATF1P18846 271 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 PRKACBP22694 351 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 EEF1B2P24534 225 aaKnown RBP17.22■□□□□ 0.35
CHFR-209ENST00000535181 MPZP25189 248 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 DMRTC1Q5HYR2 192 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 TEX36Q5VZQ5 186 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 CYB5R2Q6BCY4 276 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 CLEC9AQ6UXN8 241 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 LURAP1LQ8IV03 231 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 ZFP41Q8N8Y5 198 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 OR5D14Q8NGL3 314 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 AQP3Q92482 292 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 SMR3AQ99954 134 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 PKIBQ9C010 78 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 CCDC90BQ9GZT6 254 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 ZCCHC4Q9H5U6 513 aa17.22■□□□□ 0.35
CHFR-209ENST00000535181 PATZ1Q9HBE1 687 aaKnown RBP17.22■□□□□ 0.35
CHFR-209ENST00000535181 CSPG4Q6UVK1 2322 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 TRAV38-1A0A0B4J264 116 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 IGKV1-9A0A0C4DH69 117 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 OOEPA6NGQ2 149 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 F5H0A9 414 aaPredicted RBP17.21■□□□□ 0.35
CHFR-209ENST00000535181 J3QT63 122 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 OCM2P0CE71 109 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 CELP19835 753 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 HAAOP46952 286 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 RPS11P62280 158 aaKnown RBP eCLIP17.21■□□□□ 0.35
CHFR-209ENST00000535181 GPR50Q13585 617 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 MED22Q15528 200 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 FAM201AQ5SY85 155 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 ZNF529Q6P280 563 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 HAGHLQ6PII5 290 aaPredicted RBP17.21■□□□□ 0.35
CHFR-209ENST00000535181 DCDC5Q6ZRR9 648 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 ZNF671Q8TAW3 534 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 C12orf43Q96C57 262 aaKnown RBP17.21■□□□□ 0.35
CHFR-209ENST00000535181 BORCS8Q96FH0 119 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 TMEM246Q9BRR3 403 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 METTL17Q9H7H0 456 aaPredicted RBP17.21■□□□□ 0.35
CHFR-209ENST00000535181 NEK6Q9HC98 313 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 POLDIP2Q9Y2S7 368 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 LRRC42Q9Y546 428 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 ABCA2Q9BZC7 2435 aa17.21■□□□□ 0.35
CHFR-209ENST00000535181 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.21■□□□□ 0.353e-8■■■□□ 17.1
CHFR-209ENST00000535181 CEACAM18A8MTB9 384 aa17.2■□□□□ 0.34
CHFR-209ENST00000535181 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.2■□□□□ 0.34
CHFR-209ENST00000535181 NDUFA2O43678 99 aa17.2■□□□□ 0.34
CHFR-209ENST00000535181 NOS1APO75052 506 aaPredicted RBP17.2■□□□□ 0.34
CHFR-209ENST00000535181 ACAA1P09110 424 aaPredicted RBP17.2■□□□□ 0.34
CHFR-209ENST00000535181 MUC1P15941 1255 aaPredicted RBP17.2■□□□□ 0.34
CHFR-209ENST00000535181 EGR1P18146 543 aa17.2■□□□□ 0.34
CHFR-209ENST00000535181 AZGP1P25311 298 aaKnown RBP17.2■□□□□ 0.34
CHFR-209ENST00000535181 Q499Y3 187 aa17.2■□□□□ 0.34
CHFR-209ENST00000535181 LHFPL2Q6ZUX7 228 aa17.2■□□□□ 0.34
CHFR-209ENST00000535181 LINC01356Q8N9X3 169 aa17.2■□□□□ 0.34
CHFR-209ENST00000535181 THRSPQ92748 146 aa17.2■□□□□ 0.34
CHFR-209ENST00000535181 TMEM106AQ96A25 262 aa17.2■□□□□ 0.34
CHFR-209ENST00000535181 MSI2Q96DH6 328 aaKnown RBP17.2■□□□□ 0.34
CHFR-209ENST00000535181 GSX1Q9H4S2 264 aaPredicted RBP17.2■□□□□ 0.34
CHFR-209ENST00000535181 MIOXQ9UGB7 285 aa17.2■□□□□ 0.34
CHFR-209ENST00000535181 FAM230AA0A1W2PPH8 454 aa17.19■□□□□ 0.34
CHFR-209ENST00000535181 B4DSR2 109 aa17.19■□□□□ 0.34
CHFR-209ENST00000535181 SULT1B1O43704 296 aa17.19■□□□□ 0.34
CHFR-209ENST00000535181 RHBDL1O75783 438 aa17.19■□□□□ 0.34
CHFR-209ENST00000535181 ZNF205O95201 554 aa17.19■□□□□ 0.34
CHFR-209ENST00000535181 CD80P33681 288 aa17.19■□□□□ 0.34
CHFR-209ENST00000535181 RBP2P50120 134 aa17.19■□□□□ 0.34
CHFR-209ENST00000535181 ATP1B3P54709 279 aa17.19■□□□□ 0.34
CHFR-209ENST00000535181 IL24Q13007 206 aa17.19■□□□□ 0.34
CHFR-209ENST00000535181 MLLT11Q13015 90 aaPredicted RBP17.19■□□□□ 0.34
CHFR-209ENST00000535181 OR13C9Q8NGT0 318 aa17.19■□□□□ 0.34
CHFR-209ENST00000535181 TRMT10AQ8TBZ6 339 aaKnown RBP17.19■□□□□ 0.34
CHFR-209ENST00000535181 OPALINQ96PE5 141 aa17.19■□□□□ 0.34
CHFR-209ENST00000535181 PCDHB10Q9UN67 800 aa17.19■□□□□ 0.34
CHFR-209ENST00000535181 IGKV1-27A0A075B6S5 117 aa17.18■□□□□ 0.34
CHFR-209ENST00000535181 FAM157AC9JC47 383 aa17.18■□□□□ 0.34
CHFR-209ENST00000535181 C3orf80F5H4A9 247 aa17.18■□□□□ 0.34
CHFR-209ENST00000535181 TNFRSF13BO14836 293 aaPredicted RBP17.18■□□□□ 0.34
CHFR-209ENST00000535181 SOX2P48431 317 aa17.18■□□□□ 0.34
CHFR-209ENST00000535181 HOXA4Q00056 320 aaPredicted RBP17.18■□□□□ 0.34
CHFR-209ENST00000535181 TPBGQ13641 420 aa17.18■□□□□ 0.34
CHFR-209ENST00000535181 MICBQ29980 383 aa17.18■□□□□ 0.34
CHFR-209ENST00000535181 KCTD21Q4G0X4 260 aa17.18■□□□□ 0.34
CHFR-209ENST00000535181 ASPHD2Q6ICH7 369 aa17.18■□□□□ 0.34
CHFR-209ENST00000535181 ZNF367Q7RTV3 350 aa17.18■□□□□ 0.34
CHFR-209ENST00000535181 FAM90A1Q86YD7 464 aa17.18■□□□□ 0.34
CHFR-209ENST00000535181 CALHM1Q8IU99 346 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms