RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 RBMXP38159 391 aaKnown RBP10.07□□□□□ -0.8
COMMD9-208ENST00000533643 EFNA4P52798 201 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 ATP1B3P54709 279 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 ZNF154Q13106 437 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 HNRNPA0Q13151 305 aaKnown RBP10.07□□□□□ -0.8
COMMD9-208ENST00000533643 KISS1Q15726 138 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 DDI2Q5TDH0 399 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 LHFPL2Q6ZUX7 228 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 MOGAT3Q86VF5 341 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 LYPD6Q86Y78 171 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 ZNF573Q86YE8 665 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 TGIF2LYQ8IUE0 185 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 SCCPDHQ8NBX0 429 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 RFT1Q96AA3 541 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 GFI1Q99684 422 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 NKX3-1Q99801 234 aaPredicted RBP10.07□□□□□ -0.8
COMMD9-208ENST00000533643 SLITRK2Q9H156 845 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 GCM1Q9NP62 436 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 EDARQ9UNE0 448 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 CACNG2Q9Y698 323 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 CEPT1Q9Y6K0 416 aa10.07□□□□□ -0.8
COMMD9-208ENST00000533643 USF3Q68DE3 2245 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 NAV2Q8IVL1 2488 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 PDZD2O15018 2839 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 LYNX1G3V0Z9 82 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 MAGEB3O15480 346 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 CDC14BO60729 498 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 LYNX1P0DP58 116 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 MYL9P24844 172 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 COL8A2P25067 703 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 SDC2P34741 201 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 HAAOP46952 286 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 PTH2RP49190 550 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 MTNR1BP49286 362 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 VBP1P61758 197 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 NCS1P62166 190 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 HAGHLQ6PII5 290 aaPredicted RBP10.06□□□□□ -0.8
COMMD9-208ENST00000533643 ZNF826PQ6ZT77 177 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 CALHM1Q8IU99 346 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 CDH26Q8IXH8 852 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 ZNF420Q8TAQ5 688 aaPredicted RBP10.06□□□□□ -0.8
COMMD9-208ENST00000533643 Q8TCH9 128 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 AQP3Q92482 292 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 YIPF5Q969M3 257 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 ERGIC1Q969X5 290 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 MBD6Q96DN6 1003 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 GSX2Q9BZM3 304 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 FN3KRPQ9HA64 309 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 BEX4Q9NWD9 120 aaPredicted RBP10.06□□□□□ -0.8
COMMD9-208ENST00000533643 C1orf123Q9NWV4 160 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 TREM2Q9NZC2 230 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 PPP1R3CQ9UQK1 317 aa10.06□□□□□ -0.8
COMMD9-208ENST00000533643 AK6Q9Y3D8 172 aaKnown RBP10.06□□□□□ -0.8
COMMD9-208ENST00000533643 IGHV1-69-2A0A0G2JMI3 117 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 DPPA5A6NC42 116 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 A6NLC8 198 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 J3QT63 122 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 CDIPTO14735 213 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 PDCD5O14737 125 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 SYNGR1O43759 233 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 RP2O75695 350 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 RHBDL1O75783 438 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 CDRT1O95170 752 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 CLEC2LP0C7M8 214 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 DAOP14920 347 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 MPZP25189 248 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 ZNF93P35789 620 aaPredicted RBP10.05□□□□□ -0.8
COMMD9-208ENST00000533643 TMBIM6P55061 237 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 ATP5J2P56134 94 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 ZP1P60852 638 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 MRPS11P82912 194 aaKnown RBP10.05□□□□□ -0.8
COMMD9-208ENST00000533643 PDZK1IP1Q13113 114 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 DEFB113Q30KQ7 82 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 WDR82Q6UXN9 313 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 CDH24Q86UP0 819 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 TPRA1Q86W33 373 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 NR2C2APQ86WQ0 139 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 NKAIN3Q8N8D7 197 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 RAB2BQ8WUD1 216 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 RDH5Q92781 318 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 NINJ1Q92982 152 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 PERPQ96FX8 193 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 GPER1Q99527 375 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 PKIBQ9C010 78 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 RBM38Q9H0Z9 239 aaKnown RBP10.05□□□□□ -0.8
COMMD9-208ENST00000533643 METTL17Q9H7H0 456 aaPredicted RBP10.05□□□□□ -0.8
COMMD9-208ENST00000533643 DCAF16Q9NXF7 216 aa10.05□□□□□ -0.8
COMMD9-208ENST00000533643 A0A0G2JK05 382 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 SMIM30A4D0T7 59 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 SPRY1O43609 319 aaPredicted RBP10.04□□□□□ -0.8
COMMD9-208ENST00000533643 PLATP00750 562 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 RAB3BP20337 219 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 CFHR2P36980 270 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 PTGFRP43088 359 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 POU3F4P49335 361 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 OR10A3P58181 314 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 MXD1Q05195 221 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 ZNF181Q2M3W8 571 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 C1orf100Q5SVJ3 147 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 GLT8D1Q68CQ7 371 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms