RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 PATZ1Q9HBE1 687 aaKnown RBP10.04□□□□□ -0.8
SSBP3-214ENST00000533209 TRIM36Q9NQ86 728 aa10.04□□□□□ -0.8
SSBP3-214ENST00000533209 ERGIC3Q9Y282 383 aa10.04□□□□□ -0.8
SSBP3-214ENST00000533209 LSM2Q9Y333 95 aaKnown RBP10.04□□□□□ -0.8
SSBP3-214ENST00000533209 HIVEP2P31629 2446 aa10.04□□□□□ -0.8
SSBP3-214ENST00000533209 IGKV1-9A0A0C4DH69 117 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 SRRM5B3KS81 715 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 C3orf80F5H4A9 247 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-214ENST00000533209 TNFRSF13BO14836 293 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-214ENST00000533209 RGS10O43665 173 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 RHBDL1O75783 438 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 GATBO75879 557 aaKnown RBP10.03□□□□□ -0.8
SSBP3-214ENST00000533209 SERPINA3P01011 423 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 TAS2R43P59537 309 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 TEX36Q5VZQ5 186 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 SFRP4Q6FHJ7 346 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-214ENST00000533209 HAGHLQ6PII5 290 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-214ENST00000533209 ZNF573Q86YE8 665 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 TRMT10AQ8TBZ6 339 aaKnown RBP10.03□□□□□ -0.8
SSBP3-214ENST00000533209 NPRL2Q8WTW4 380 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 GHSRQ92847 366 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 RAB39BQ96DA2 213 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 PGLYRP3Q96LB9 341 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 TECTBQ96PL2 329 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 MND1Q9BWT6 205 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 YAE1D1Q9NRH1 226 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 PCDHB10Q9UN67 800 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 SLC7A11Q9UPY5 501 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 DHDHQ9UQ10 334 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 ZNF281Q9Y2X9 895 aa10.03□□□□□ -0.8
SSBP3-214ENST00000533209 SONP18583 2426 aaKnown RBP10.03□□□□□ -0.8
SSBP3-214ENST00000533209 YLPM1P49750 1951 aaKnown RBP10.03□□□□□ -0.8
SSBP3-214ENST00000533209 NF1P21359 2839 aa10.02□□□□□ -0.8
SSBP3-214ENST00000533209 NIPBLQ6KC79 2804 aaeCLIP10.02□□□□□ -0.8
SSBP3-214ENST00000533209 SETD2Q9BYW2 2564 aaPredicted RBP10.02□□□□□ -0.81
SSBP3-214ENST00000533209 IGKV1-27A0A075B6S5 117 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 IGHV3OR15-7A0A075B7D8 119 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 FAM230AA0A1W2PPH8 454 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 OOEPA6NGQ2 149 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 B4DSR2 109 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 J3QT63 122 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 AKR7A2O43488 359 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 TGFAP01135 160 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 WNT2P09544 360 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 ATF1P18846 271 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 HAAOP46952 286 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 FUT6P51993 359 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 SEC61A1P61619 476 aaKnown RBP10.02□□□□□ -0.81
SSBP3-214ENST00000533209 RPS11P62280 158 aaKnown RBP eCLIP10.02□□□□□ -0.81
SSBP3-214ENST00000533209 BDH1Q02338 343 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 ACSM1Q08AH1 577 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 FAM166AQ6J272 317 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 LYPD2Q6UXB3 125 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 DCDC5Q6ZRR9 648 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 PRSS48Q7RTY5 328 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 ANGPTL5Q86XS5 388 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 FAM90A1Q86YD7 464 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 PARP16Q8N5Y8 322 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 DNAAF1Q8NEP3 725 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 GPR148Q8TDV2 347 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 TSEN15Q8WW01 171 aaKnown RBP10.02□□□□□ -0.81
SSBP3-214ENST00000533209 SEH1LQ96EE3 360 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 OR5M11Q96RB7 305 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 WDR13Q9H1Z4 485 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 LPAR2Q9HBW0 351 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 MIOXQ9UGB7 285 aa10.02□□□□□ -0.81
SSBP3-214ENST00000533209 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.02□□□□□ -0.814e-9■■■■■ 31.3
SSBP3-214ENST00000533209 FN1P02751 2386 aaKnown RBP10.02□□□□□ -0.81
SSBP3-214ENST00000533209 TRAV38-1A0A0B4J264 116 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 TRBV5-5A0A0J9YX44 114 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 PNMA8CA0A1B0GUJ8 204 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 A8MV72 311 aaPredicted RBP10.01□□□□□ -0.81
SSBP3-214ENST00000533209 PLPP2O43688 288 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 SYNGR1O43759 233 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 CD1AP06126 327 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 MSMBP08118 114 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 MUC1P15941 1255 aaPredicted RBP10.01□□□□□ -0.81
SSBP3-214ENST00000533209 CELP19835 753 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 PRKACBP22694 351 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 CPT2P23786 658 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 MPZP25189 248 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 AZGP1P25311 298 aaKnown RBP10.01□□□□□ -0.81
SSBP3-214ENST00000533209 ZFP36P26651 326 aaKnown RBP10.01□□□□□ -0.81
SSBP3-214ENST00000533209 SOX2P48431 317 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 GMFBP60983 142 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 CNN3Q15417 329 aaKnown RBP10.01□□□□□ -0.81
SSBP3-214ENST00000533209 SPHARQ15513 63 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 ASPHD2Q6ICH7 369 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 CALHM1Q8IU99 346 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 OR5D14Q8NGL3 314 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 OR13C5Q8NGS8 318 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 OR13C9Q8NGT0 318 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 ZNF671Q8TAW3 534 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 BORCS8Q96FH0 119 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 PKIBQ9C010 78 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 ZCCHC4Q9H5U6 513 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 BLOC1S6Q9UL45 172 aa10.01□□□□□ -0.81
SSBP3-214ENST00000533209 ANK3Q12955 4377 aaKnown RBP10.01□□□□□ -0.81
SSBP3-214ENST00000533209 KIAA1324LA8MWY0 1029 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms