RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 NRARPQ7Z6K4 114 aa13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 PIGMQ9H3S5 423 aa13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 HEYLQ9NQ87 328 aaPredicted RBP13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 LAMP3Q9UQV4 416 aa13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 TMEM30CPA0ZSE6 113 aa13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 EIF4EP06730 217 aaKnown RBP13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 FOXO1Q12778 655 aa13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 ZP4Q12836 540 aa13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 CDONQ4KMG0 1287 aa13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 KRBOX4Q5JUW0 171 aa13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 GALMQ96C23 342 aa13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 CNTNAP3BQ96NU0 1288 aa13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 C12orf4Q9NQ89 552 aa13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 GHRLQ9UBU3 117 aa13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 MDC1Q14676 2089 aaKnown RBP13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 TICRRQ7Z2Z1 1910 aa13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 PRAMEF5Q5TYX0 476 aa13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 PRAMEF6Q5VXH4 476 aa13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 FAAP20Q6NZ36 180 aa13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 APH1BQ8WW43 257 aa13.8□□□□□ -0.2
PPFIA1-222ENST00000532504 SFXN3Q9BWM7 321 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 SUCNR1Q9BXA5 334 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 CYSLTR2Q9NS75 346 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 PLXNA4Q9HCM2 1894 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 INTS1Q8N201 2190 aaKnown RBP13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 LOC102723996A0A087X1L8 192 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 MS4A18H0YCH9 400 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 SHOXO15266 292 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 IFI6P09912 130 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 MS4A18Q3C1V0 323 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 VWA1Q6PCB0 445 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 MSI2Q96DH6 328 aaKnown RBP13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 CD79BP40259 229 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 PDZD9Q8IXQ8 264 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 OR5B21A6NL26 309 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 OR5H8P0DN80 308 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 CCR9P51686 369 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 FAM27E3Q08E93 113 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 FAM27BQ5VT28 67 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 STOML3Q8TAV4 291 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 AIFM2Q9BRQ8 373 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 STARD10Q9Y365 291 aa13.79□□□□□ -0.2
PPFIA1-222ENST00000532504 TRAV38-1A0A0B4J264 116 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 ATP6V1G2-DDX39BF2Z307 99 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 GPR137BO60478 399 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 ADRA2AP08913 450 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 ALDH3B1P43353 468 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 H2BFWTQ7Z2G1 175 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 POLEQ07864 2286 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 GABRA4P48169 554 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 BCL2A1Q16548 175 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 SLC35G3Q8N808 338 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 GNB4Q9HAV0 340 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.78□□□□□ -0.22e-9■■■■■ 67.6
PPFIA1-222ENST00000532504 MSRB2Q9Y3D2 182 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 RPS4Y1P22090 263 aaKnown RBP13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 BAMBIQ13145 260 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 TATDN3Q17R31 274 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 OR52W1Q6IF63 320 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 BTNL3Q6UXE8 466 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 SHARPINQ9H0F6 387 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 NCBP2LA6PVI3 153 aaKnown RBP13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 DCTN6O00399 190 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 PLPP2O43688 288 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 RAMP1O60894 148 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 PGA4P0DJD7 388 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 PGA3P0DJD8 388 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 NBL1P41271 181 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 RFX2P48378 723 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 GGTLC2Q14390 218 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 BEX5Q5H9J7 111 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 ADAMTS17Q8TE56 1095 aa13.78□□□□□ -0.2
PPFIA1-222ENST00000532504 IGHV3-43A0A0B4J1X8 118 aa13.77□□□□□ -0.2
PPFIA1-222ENST00000532504 HMGB3O15347 200 aaKnown RBP13.77□□□□□ -0.2
PPFIA1-222ENST00000532504 IGHV3-43DP0DP04 118 aa13.77□□□□□ -0.2
PPFIA1-222ENST00000532504 AKR1C8PQ5T2L2 129 aa13.77□□□□□ -0.2
PPFIA1-222ENST00000532504 RNF133Q8WVZ7 376 aa13.77□□□□□ -0.2
PPFIA1-222ENST00000532504 DSPPQ9NZW4 1301 aa13.77□□□□□ -0.2
PPFIA1-222ENST00000532504 GABARAPH6UMI1 98 aa13.77□□□□□ -0.2
PPFIA1-222ENST00000532504 UCP2P55851 309 aa13.77□□□□□ -0.2
PPFIA1-222ENST00000532504 ACSM1Q08AH1 577 aa13.77□□□□□ -0.2
PPFIA1-222ENST00000532504 FAM76BQ5HYJ3 339 aa13.77□□□□□ -0.2
PPFIA1-222ENST00000532504 DPCDQ9BVM2 203 aaPredicted RBP13.77□□□□□ -0.2
PPFIA1-222ENST00000532504 HIPK2Q9H2X6 1198 aa13.77□□□□□ -0.2
PPFIA1-222ENST00000532504 FRRS1LQ9P0K9 344 aa13.77□□□□□ -0.2
PPFIA1-222ENST00000532504 IGHV3OR15-7A0A075B7D8 119 aa13.77□□□□□ -0.21
PPFIA1-222ENST00000532504 CRYBA1P05813 215 aa13.77□□□□□ -0.21
PPFIA1-222ENST00000532504 HRH1P35367 487 aa13.77□□□□□ -0.21
PPFIA1-222ENST00000532504 DLX5P56178 289 aa13.77□□□□□ -0.21
PPFIA1-222ENST00000532504 RTL8BQ17RB0 113 aa13.77□□□□□ -0.21
PPFIA1-222ENST00000532504 XAF1Q6GPH4 301 aa13.77□□□□□ -0.21
PPFIA1-222ENST00000532504 UPRTQ96BW1 309 aa13.77□□□□□ -0.21
PPFIA1-222ENST00000532504 FAAP24Q9BTP7 215 aa13.77□□□□□ -0.21
PPFIA1-222ENST00000532504 ZNF318Q5VUA4 2279 aa13.77□□□□□ -0.21
PPFIA1-222ENST00000532504 IGKV1D-42A0A075B6H8 117 aa13.77□□□□□ -0.21
PPFIA1-222ENST00000532504 ZIC3O60481 467 aa13.77□□□□□ -0.21
PPFIA1-222ENST00000532504 CYTIPO60759 359 aa13.77□□□□□ -0.21
PPFIA1-222ENST00000532504 NKX2-5P52952 324 aaPredicted RBP13.77□□□□□ -0.21
PPFIA1-222ENST00000532504 AKR1C1Q04828 323 aa13.77□□□□□ -0.21
PPFIA1-222ENST00000532504 TCF15Q12870 199 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms