RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 PPIAL4DF5H284 164 aa18.74■□□□□ 0.59
LRRK1-208ENST00000532029 PPIAL4FP0DN26 164 aa18.74■□□□□ 0.59
LRRK1-208ENST00000532029 HAAOP46952 286 aa18.74■□□□□ 0.59
LRRK1-208ENST00000532029 ATP1B3P54709 279 aa18.74■□□□□ 0.59
LRRK1-208ENST00000532029 RPS11P62280 158 aaKnown RBP eCLIP18.74■□□□□ 0.59
LRRK1-208ENST00000532029 HAGHLQ6PII5 290 aaPredicted RBP18.74■□□□□ 0.59
LRRK1-208ENST00000532029 WDR82Q6UXN9 313 aa18.74■□□□□ 0.59
LRRK1-208ENST00000532029 CIARTQ8N365 385 aaPredicted RBP18.74■□□□□ 0.59
LRRK1-208ENST00000532029 MAPK1IP1LQ8NDC0 245 aa18.74■□□□□ 0.59
LRRK1-208ENST00000532029 OR10Z1Q8NGY1 313 aa18.74■□□□□ 0.59
LRRK1-208ENST00000532029 C18orf12Q96KH6 178 aa18.74■□□□□ 0.59
LRRK1-208ENST00000532029 COX4I2Q96KJ9 171 aa18.74■□□□□ 0.59
LRRK1-208ENST00000532029 OR14A2Q96R54 314 aa18.74■□□□□ 0.59
LRRK1-208ENST00000532029 TMUB1Q9BVT8 246 aa18.74■□□□□ 0.59
LRRK1-208ENST00000532029 PPIAL4AQ9Y536 164 aa18.74■□□□□ 0.59
LRRK1-208ENST00000532029 IGKV1-9A0A0C4DH69 117 aa18.73■□□□□ 0.59
LRRK1-208ENST00000532029 SULT1B1O43704 296 aa18.73■□□□□ 0.59
LRRK1-208ENST00000532029 IGHV2-70P01814 119 aa18.73■□□□□ 0.59
LRRK1-208ENST00000532029 CPEP16870 476 aa18.73■□□□□ 0.59
LRRK1-208ENST00000532029 RAB3AP20336 220 aa18.73■□□□□ 0.59
LRRK1-208ENST00000532029 MAPK3P27361 379 aaPredicted RBP18.73■□□□□ 0.59
LRRK1-208ENST00000532029 MDH2P40926 338 aaKnown RBP18.73■□□□□ 0.59
LRRK1-208ENST00000532029 RBP2P50120 134 aa18.73■□□□□ 0.59
LRRK1-208ENST00000532029 PPP3R1P63098 170 aa18.73■□□□□ 0.59
LRRK1-208ENST00000532029 ARMCX4Q5H9R4 360 aa18.73■□□□□ 0.59
LRRK1-208ENST00000532029 FAM201AQ5SY85 155 aa18.73■□□□□ 0.59
LRRK1-208ENST00000532029 UBE2UQ5VVX9 321 aa18.73■□□□□ 0.59
LRRK1-208ENST00000532029 LHFPL2Q6ZUX7 228 aa18.73■□□□□ 0.59
LRRK1-208ENST00000532029 MUC20Q8N307 709 aaPredicted RBP18.73■□□□□ 0.59
LRRK1-208ENST00000532029 ZNF671Q8TAW3 534 aa18.73■□□□□ 0.59
LRRK1-208ENST00000532029 GAL3ST1Q99999 423 aa18.73■□□□□ 0.59
LRRK1-208ENST00000532029 METTL17Q9H7H0 456 aaPredicted RBP18.73■□□□□ 0.59
LRRK1-208ENST00000532029 TAS2R4Q9NYW5 299 aa18.73■□□□□ 0.59
LRRK1-208ENST00000532029 CKLFQ9UBR5 152 aa18.73■□□□□ 0.59
LRRK1-208ENST00000532029 A0A096LNT2 108 aa18.72■□□□□ 0.59
LRRK1-208ENST00000532029 ZNF879B4DU55 563 aa18.72■□□□□ 0.59
LRRK1-208ENST00000532029 J3QT63 122 aa18.72■□□□□ 0.59
LRRK1-208ENST00000532029 ZNF205O95201 554 aa18.72■□□□□ 0.59
LRRK1-208ENST00000532029 HEXAP06865 529 aa18.72■□□□□ 0.59
LRRK1-208ENST00000532029 HCKP08631 526 aa18.72■□□□□ 0.59
LRRK1-208ENST00000532029 PCMT1P22061 227 aa18.72■□□□□ 0.59
LRRK1-208ENST00000532029 PSMB9P28065 219 aa18.72■□□□□ 0.59
LRRK1-208ENST00000532029 ZMYND11Q15326 602 aa18.72■□□□□ 0.59
LRRK1-208ENST00000532029 TRAM1Q15629 374 aa18.72■□□□□ 0.59
LRRK1-208ENST00000532029 GCSAMQ8N6F7 178 aa18.72■□□□□ 0.59
LRRK1-208ENST00000532029 TSPAN14Q8NG11 270 aa18.72■□□□□ 0.59
LRRK1-208ENST00000532029 AQP3Q92482 292 aa18.72■□□□□ 0.59
LRRK1-208ENST00000532029 POLDIP2Q9Y2S7 368 aa18.72■□□□□ 0.59
LRRK1-208ENST00000532029 A0A087WXM4 84 aa18.71■□□□□ 0.59
LRRK1-208ENST00000532029 LGALS8O00214 317 aa18.71■□□□□ 0.59
LRRK1-208ENST00000532029 MAGEB3O15480 346 aa18.71■□□□□ 0.59
LRRK1-208ENST00000532029 ALX3O95076 343 aa18.71■□□□□ 0.59
LRRK1-208ENST00000532029 CD80P33681 288 aa18.71■□□□□ 0.59
LRRK1-208ENST00000532029 CFHR2P36980 270 aa18.71■□□□□ 0.59
LRRK1-208ENST00000532029 MTCP1P56278 107 aa18.71■□□□□ 0.59
LRRK1-208ENST00000532029 TMEM155Q4W5P6 130 aa18.71■□□□□ 0.59
LRRK1-208ENST00000532029 ACSM3Q53FZ2 586 aa18.71■□□□□ 0.59
LRRK1-208ENST00000532029 LRRC28Q86X40 367 aaPredicted RBP18.71■□□□□ 0.59
LRRK1-208ENST00000532029 ANGPTL5Q86XS5 388 aa18.71■□□□□ 0.59
LRRK1-208ENST00000532029 PHC2Q8IXK0 858 aa18.71■□□□□ 0.59
LRRK1-208ENST00000532029 SPICQ8N5J4 248 aa18.71■□□□□ 0.59
LRRK1-208ENST00000532029 CLDND2Q8NHS1 167 aa18.71■□□□□ 0.59
LRRK1-208ENST00000532029 TMEM203Q969S6 136 aa18.71■□□□□ 0.59
LRRK1-208ENST00000532029 PKIBQ9C010 78 aa18.71■□□□□ 0.59
LRRK1-208ENST00000532029 ZNF696Q9H7X3 374 aa18.71■□□□□ 0.59
LRRK1-208ENST00000532029 PCDHB10Q9UN67 800 aa18.71■□□□□ 0.59
LRRK1-208ENST00000532029 IGKV1-27A0A075B6S5 117 aa18.7■□□□□ 0.58
LRRK1-208ENST00000532029 TRBV5-7A0A0A0MS05 114 aa18.7■□□□□ 0.58
LRRK1-208ENST00000532029 SRRM5B3KS81 715 aa18.7■□□□□ 0.58
LRRK1-208ENST00000532029 WNT9BO14905 357 aa18.7■□□□□ 0.58
LRRK1-208ENST00000532029 RHBDL1O75783 438 aa18.7■□□□□ 0.58
LRRK1-208ENST00000532029 FSTL3O95633 263 aa18.7■□□□□ 0.58
LRRK1-208ENST00000532029 LHBP01229 141 aa18.7■□□□□ 0.58
LRRK1-208ENST00000532029 INHBBP09529 407 aa18.7■□□□□ 0.58
LRRK1-208ENST00000532029 FOSL1P15407 271 aa18.7■□□□□ 0.58
LRRK1-208ENST00000532029 PSMA1P25786 263 aaKnown RBP18.7■□□□□ 0.58
LRRK1-208ENST00000532029 KCNJ8Q15842 424 aa18.7■□□□□ 0.58
LRRK1-208ENST00000532029 C19orf18Q8NEA5 215 aa18.7■□□□□ 0.58
LRRK1-208ENST00000532029 DEFB108BQ8NET1 73 aa18.7■□□□□ 0.58
LRRK1-208ENST00000532029 CPNE2Q96FN4 548 aaPredicted RBP18.7■□□□□ 0.58
LRRK1-208ENST00000532029 DERL3Q96Q80 235 aa18.7■□□□□ 0.58
LRRK1-208ENST00000532029 TMEM165Q9HC07 324 aa18.7■□□□□ 0.58
LRRK1-208ENST00000532029 ITPR3Q14573 2671 aa18.7■□□□□ 0.58
LRRK1-208ENST00000532029 TRAV38-1A0A0B4J264 116 aa18.69■□□□□ 0.58
LRRK1-208ENST00000532029 A0A1W2PPK0 400 aa18.69■□□□□ 0.58
LRRK1-208ENST00000532029 OOEPA6NGQ2 149 aa18.69■□□□□ 0.58
LRRK1-208ENST00000532029 C3orf80F5H4A9 247 aa18.69■□□□□ 0.58
LRRK1-208ENST00000532029 AKR7A2O43488 359 aa18.69■□□□□ 0.58
LRRK1-208ENST00000532029 SYNGR1O43759 233 aa18.69■□□□□ 0.58
LRRK1-208ENST00000532029 PLATP00750 562 aa18.69■□□□□ 0.58
LRRK1-208ENST00000532029 EGR1P18146 543 aa18.69■□□□□ 0.58
LRRK1-208ENST00000532029 TGFBR2P37173 567 aa18.69■□□□□ 0.58
LRRK1-208ENST00000532029 POU3F4P49335 361 aa18.69■□□□□ 0.58
LRRK1-208ENST00000532029 GMFBP60983 142 aa18.69■□□□□ 0.58
LRRK1-208ENST00000532029 RPS25P62851 125 aaKnown RBP18.69■□□□□ 0.58
LRRK1-208ENST00000532029 HOXA4Q00056 320 aaPredicted RBP18.69■□□□□ 0.58
LRRK1-208ENST00000532029 SFRP4Q6FHJ7 346 aaPredicted RBP18.69■□□□□ 0.58
LRRK1-208ENST00000532029 ZNF529Q6P280 563 aa18.69■□□□□ 0.58
LRRK1-208ENST00000532029 CALHM1Q8IU99 346 aa18.69■□□□□ 0.58
LRRK1-208ENST00000532029 OR51A2Q8NGJ7 313 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms