RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 OR10Z1Q8NGY1 313 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 ZNF671Q8TAW3 534 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 SPSB1Q96BD6 273 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 PGLYRP3Q96LB9 341 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 OR5M11Q96RB7 305 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 ISYNA1Q9NPH2 558 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 DCAF16Q9NXF7 216 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 PPIAL4AQ9Y536 164 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 MXRA5Q9NR99 2828 aa12.85□□□□□ -0.35
CCS-206ENST00000530961 PQLC2LA1A4F0 135 aa12.85□□□□□ -0.35
CCS-206ENST00000530961 LHBP01229 141 aa12.85□□□□□ -0.35
CCS-206ENST00000530961 OCM2P0CE71 109 aa12.85□□□□□ -0.35
CCS-206ENST00000530961 OCMP0CE72 109 aaPredicted RBP12.85□□□□□ -0.35
CCS-206ENST00000530961 ATF1P18846 271 aa12.85□□□□□ -0.35
CCS-206ENST00000530961 CPT2P23786 658 aa12.85□□□□□ -0.35
CCS-206ENST00000530961 TBCEQ15813 527 aaPredicted RBP12.85□□□□□ -0.35
CCS-206ENST00000530961 KCNJ8Q15842 424 aa12.85□□□□□ -0.35
CCS-206ENST00000530961 WDR82Q6UXN9 313 aa12.85□□□□□ -0.35
CCS-206ENST00000530961 ZNF826PQ6ZT77 177 aa12.85□□□□□ -0.35
CCS-206ENST00000530961 SPICQ8N5J4 248 aa12.85□□□□□ -0.35
CCS-206ENST00000530961 MS4A15Q8N5U1 240 aa12.85□□□□□ -0.35
CCS-206ENST00000530961 ZFP41Q8N8Y5 198 aa12.85□□□□□ -0.35
CCS-206ENST00000530961 SCCPDHQ8NBX0 429 aa12.85□□□□□ -0.35
CCS-206ENST00000530961 RGP1Q92546 391 aaPredicted RBP12.85□□□□□ -0.35
CCS-206ENST00000530961 THRSPQ92748 146 aa12.85□□□□□ -0.35
CCS-206ENST00000530961 RPL3LQ92901 407 aaKnown RBP12.85□□□□□ -0.35
CCS-206ENST00000530961 ZCCHC4Q9H5U6 513 aa12.85□□□□□ -0.35
CCS-206ENST00000530961 ISPDA4D126 451 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 HAAOP46952 286 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 RBP2P50120 134 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 MLLT11Q13015 90 aaPredicted RBP12.84□□□□□ -0.35
CCS-206ENST00000530961 ZMYND11Q15326 602 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 TMEM249Q2WGJ8 235 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 Q499Y3 187 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 KCTD21Q4G0X4 260 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 DMRTC1Q5HYR2 192 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 MAPK1IP1LQ8NDC0 245 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 CLDND2Q8NHS1 167 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 LRRC29Q8WV35 223 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 TMEM106AQ96A25 262 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 BORCS8Q96FH0 119 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 SMR3AQ99954 134 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 GAL3ST1Q99999 423 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 TMEM165Q9HC07 324 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 ACOT13Q9NPJ3 140 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 POLDIP2Q9Y2S7 368 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 ARFGEF3Q5TH69 2177 aa12.84□□□□□ -0.35
CCS-206ENST00000530961 ARID1AO14497 2285 aa12.83□□□□□ -0.35
CCS-206ENST00000530961 TRAV38-1A0A0B4J264 116 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 IGKV1-9A0A0C4DH69 117 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 TRBV5-5A0A0J9YX44 114 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 PNMA8CA0A1B0GUJ8 204 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 FAM230AA0A1W2PPH8 454 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 LGALS8O00214 317 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 WNT9BO14905 357 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 NDUFA2O43678 99 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 HSMCR30P0CW71 290 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 MAP2K4P45985 399 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 SOX2P48431 317 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 GZMKP49863 264 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 ATP1B3P54709 279 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 RPS11P62280 158 aaKnown RBP eCLIP12.83□□□□□ -0.36
CCS-206ENST00000530961 EMX1Q04741 257 aaPredicted RBP12.83□□□□□ -0.36
CCS-206ENST00000530961 TPBGQ13641 420 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 DOC2BQ14184 412 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 HAGHLQ6PII5 290 aaPredicted RBP12.83□□□□□ -0.36
CCS-206ENST00000530961 LHFPL2Q6ZUX7 228 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 ZNF367Q7RTV3 350 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 GCSAMQ8N6F7 178 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 AQP3Q92482 292 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 UFD1Q92890 307 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 RAB39BQ96DA2 213 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 MGLLQ99685 303 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 PKIBQ9C010 78 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 PCDHB10Q9UN67 800 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 LRCH1Q9Y2L9 728 aa12.83□□□□□ -0.36
CCS-206ENST00000530961 OOEPA6NGQ2 149 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 SRRM5B3KS81 715 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 J3QT63 122 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 ZNF205O95201 554 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 ACAA1P09110 424 aaPredicted RBP12.82□□□□□ -0.36
CCS-206ENST00000530961 MUC1P15941 1255 aaPredicted RBP12.82□□□□□ -0.36
CCS-206ENST00000530961 RAB3AP20336 220 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 MPZP25189 248 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 AZGP1P25311 298 aaKnown RBP12.82□□□□□ -0.36
CCS-206ENST00000530961 MTCP1P56278 107 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 LMO4P61968 165 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 HNRNPA0Q13151 305 aaKnown RBP12.82□□□□□ -0.36
CCS-206ENST00000530961 MICBQ29980 383 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 ZNF404Q494X3 552 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 FAM201AQ5SY85 155 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 TEX36Q5VZQ5 186 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 CYB5R2Q6BCY4 276 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 ZNF529Q6P280 563 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 ZNF773Q6PK81 442 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 SPARTQ8N0X7 666 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 BOLLQ8N9W6 283 aaKnown RBP12.82□□□□□ -0.36
CCS-206ENST00000530961 OR13C9Q8NGT0 318 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 TRMT10AQ8TBZ6 339 aaKnown RBP12.82□□□□□ -0.36
CCS-206ENST00000530961 NPRL2Q8WTW4 380 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms