RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 POLDIP2Q9Y2S7 368 aa10.4□□□□□ -0.74
CCS-202ENST00000525435 IGHV3-64DA0A0J9YX35 117 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 TRBV5-5A0A0J9YX44 114 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 hCG_1807616A0A1W2PRN6 198 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 SMAD7O15105 426 aaKnown RBP10.39□□□□□ -0.75
CCS-202ENST00000525435 LMX1BO60663 402 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 NOS1APO75052 506 aaPredicted RBP10.39□□□□□ -0.75
CCS-202ENST00000525435 GPX5O75715 221 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 CYB5R3P00387 301 aaPredicted RBP10.39□□□□□ -0.75
CCS-202ENST00000525435 OCM2P0CE71 109 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 MPZP25189 248 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 RBP2P50120 134 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 ATP1B3P54709 279 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 RPS11P62280 158 aaKnown RBP eCLIP10.39□□□□□ -0.75
CCS-202ENST00000525435 MLLT11Q13015 90 aaPredicted RBP10.39□□□□□ -0.75
CCS-202ENST00000525435 ZMYND11Q15326 602 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 Q499Y3 187 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 KCTD21Q4G0X4 260 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 AVPI1Q5T686 147 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 TEX36Q5VZQ5 186 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 CYB5R2Q6BCY4 276 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 ZNF529Q6P280 563 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 GCSAMQ8N6F7 178 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 CLDND2Q8NHS1 167 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 TSEN15Q8WW01 171 aaKnown RBP10.39□□□□□ -0.75
CCS-202ENST00000525435 AQP3Q92482 292 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 RGP1Q92546 391 aaPredicted RBP10.39□□□□□ -0.75
CCS-202ENST00000525435 BORCS8Q96FH0 119 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 GAL3ST1Q99999 423 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 MIOXQ9UGB7 285 aa10.39□□□□□ -0.75
CCS-202ENST00000525435 DYSFO75923 2080 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 IGKV1-9A0A0C4DH69 117 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 OOEPA6NGQ2 149 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 SRRM5B3KS81 715 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 B4DSR2 109 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 H3BSH0 61 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 J3QT63 122 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 TNFRSF13BO14836 293 aaPredicted RBP10.38□□□□□ -0.75
CCS-202ENST00000525435 WNT9BO14905 357 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 ALDOBP05062 364 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 OCMP0CE72 109 aaPredicted RBP10.38□□□□□ -0.75
CCS-202ENST00000525435 CPEP16870 476 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 PSMA1P25786 263 aaKnown RBP10.38□□□□□ -0.75
CCS-202ENST00000525435 MAPK3P27361 379 aaPredicted RBP10.38□□□□□ -0.75
CCS-202ENST00000525435 HAAOP46952 286 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 MTCP1P56278 107 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 EMX1Q04741 257 aaPredicted RBP10.38□□□□□ -0.75
CCS-202ENST00000525435 IL24Q13007 206 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 TRAM1Q15629 374 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 MICBQ29980 383 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 C11orf91Q3C1V1 193 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 ZNF404Q494X3 552 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 HAGHLQ6PII5 290 aaPredicted RBP10.38□□□□□ -0.75
CCS-202ENST00000525435 ZNF826PQ6ZT77 177 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 LHFPL2Q6ZUX7 228 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 ZNF367Q7RTV3 350 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 FAM90A1Q86YD7 464 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 LRRC29Q8WV35 223 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 PHYHIPQ92561 330 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 FCGR1BQ92637 280 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 UFD1Q92890 307 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 RPL3LQ92901 407 aaKnown RBP10.38□□□□□ -0.75
CCS-202ENST00000525435 TMEM106AQ96A25 262 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 CPNE2Q96FN4 548 aaPredicted RBP10.38□□□□□ -0.75
CCS-202ENST00000525435 MGLLQ99685 303 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 PATZ1Q9HBE1 687 aaKnown RBP10.38□□□□□ -0.75
CCS-202ENST00000525435 ACOT13Q9NPJ3 140 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 PCDHB10Q9UN67 800 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 LRCH1Q9Y2L9 728 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 ABCA1O95477 2261 aa10.38□□□□□ -0.75
CCS-202ENST00000525435 ZNF469Q96JG9 3925 aaPredicted RBP10.38□□□□□ -0.75
CCS-202ENST00000525435 FAM230AA0A1W2PPH8 454 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 ISPDA4D126 451 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 ZNF879B4DU55 563 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 MAGEB3O15480 346 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 SULT1B1O43704 296 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 CD5LO43866 347 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 IGHV2-5P01817 119 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 IGHV4-31P0DP07 118 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 RAB3AP20336 220 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 AZGP1P25311 298 aaKnown RBP10.37□□□□□ -0.75
CCS-202ENST00000525435 ATPAF1Q5TC12 328 aaPredicted RBP10.37□□□□□ -0.75
CCS-202ENST00000525435 ZNF773Q6PK81 442 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 UNQ9370/PRO34162Q6UXP9 181 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 DCDC5Q6ZRR9 648 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 SPARTQ8N0X7 666 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 ZFP41Q8N8Y5 198 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 LINC01356Q8N9X3 169 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 OPALINQ96PE5 141 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 TMEM246Q9BRR3 403 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 DNTTIP1Q9H147 329 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 ZNF665Q9H7R5 613 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 RHOFQ9HBH0 211 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 TMEM138Q9NPI0 162 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 KAAG1Q9UBP8 84 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 CKLFQ9UBR5 152 aa10.37□□□□□ -0.75
CCS-202ENST00000525435 MTORP42345 2549 aa10.36□□□□□ -0.75
CCS-202ENST00000525435 TRBV5-7A0A0A0MS05 114 aa10.36□□□□□ -0.75
CCS-202ENST00000525435 F5H0A9 414 aaPredicted RBP10.36□□□□□ -0.75
CCS-202ENST00000525435 TNFAIP8O95379 198 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms