RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 TMEM212A6NML5 194 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 F5H0A9 414 aaPredicted RBP11.67□□□□□ -0.54
USP46-209ENST00000514536 RHBDL1O75783 438 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 RPS2P15880 293 aaKnown RBP11.67□□□□□ -0.54
USP46-209ENST00000514536 ZNF20P17024 532 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 ZFP36P26651 326 aaKnown RBP11.67□□□□□ -0.54
USP46-209ENST00000514536 CCDC58Q4VC31 144 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 HAGHLQ6PII5 290 aaPredicted RBP11.67□□□□□ -0.54
USP46-209ENST00000514536 OR13C3Q8NGS6 347 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 SEH1LQ96EE3 360 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 SLC7A11Q9UPY5 501 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 OGG1O15527 345 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 AKR7A2O43488 359 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 GATBO75879 557 aaKnown RBP11.66□□□□□ -0.54
USP46-209ENST00000514536 LALBAP00709 142 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 GYPAP02724 150 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 CDK1P06493 297 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 HAAOP46952 286 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 CDK5R1Q15078 307 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 DCDC5Q6ZRR9 648 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 FAM90A1Q86YD7 464 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 ZNF573Q86YE8 665 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 ZNF485Q8NCK3 441 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 OR10Z1Q8NGY1 313 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 ZNF671Q8TAW3 534 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 AQP3Q92482 292 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 SGCDQ92629 289 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 MYDGFQ969H8 173 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 NEIL1Q96FI4 390 aaPredicted RBP11.66□□□□□ -0.54
USP46-209ENST00000514536 CNBD2Q96M20 576 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 CHST5Q9GZS9 411 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 WDR13Q9H1Z4 485 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 RAB26Q9ULW5 256 aa11.66□□□□□ -0.54
USP46-209ENST00000514536 FN1P02751 2386 aaKnown RBP11.65□□□□□ -0.54
USP46-209ENST00000514536 TRAV20A0A0B4J274 112 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 SRRM5B3KS81 715 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.65□□□□□ -0.54
USP46-209ENST00000514536 TNFRSF13BO14836 293 aaPredicted RBP11.65□□□□□ -0.54
USP46-209ENST00000514536 PHF1O43189 567 aaPredicted RBP11.65□□□□□ -0.54
USP46-209ENST00000514536 CRLF1O75462 422 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 FOXH1O75593 365 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 RPSAP08865 295 aaKnown RBP11.65□□□□□ -0.54
USP46-209ENST00000514536 KCNJ8Q15842 424 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 MICBQ29980 383 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 CR1LQ2VPA4 569 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 ESCO2Q56NI9 601 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 TEX36Q5VZQ5 186 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 ANGPTL5Q86XS5 388 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 NANOGP1Q8N7R0 232 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 ZFP41Q8N8Y5 198 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 OR5T2Q8NGG2 359 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 OR8B3Q8NGG8 313 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 PP6455Q8WZ26 134 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 OR8B2Q96RD0 313 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 TRIM36Q9NQ86 728 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 SNTG1Q9NSN8 517 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 PAK1IP1Q9NWT1 392 aaPredicted RBP11.65□□□□□ -0.54
USP46-209ENST00000514536 TMEM160Q9NX00 188 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 ERGIC3Q9Y282 383 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 TPRKBQ9Y3C4 175 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 PCDHGB5Q9Y5G0 923 aa11.65□□□□□ -0.54
USP46-209ENST00000514536 MALRD1Q5VYJ5 2156 aa11.65□□□□□ -0.55
USP46-209ENST00000514536 ABCA2Q9BZC7 2435 aa11.65□□□□□ -0.55
USP46-209ENST00000514536 IGKV1-9A0A0C4DH69 117 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 MYL12BO14950 172 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 ADAM20O43506 726 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 NDUFA2O43678 99 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 SYNGR1O43759 233 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 MUC1P15941 1255 aaPredicted RBP11.64□□□□□ -0.55
USP46-209ENST00000514536 ATF1P18846 271 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 CPT2P23786 658 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 FUT6P51993 359 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 FAM120AOSQ5T036 256 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 FAHD2BQ6P2I3 314 aaPredicted RBP11.64□□□□□ -0.55
USP46-209ENST00000514536 IL17RELQ6ZVW7 336 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 UTS2BQ765I0 119 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 NLRC3Q7RTR2 1065 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 RPS4Y2Q8TD47 263 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 TSEN15Q8WW01 171 aaKnown RBP11.64□□□□□ -0.55
USP46-209ENST00000514536 FAHD2AQ96GK7 314 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 TECTBQ96PL2 329 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 SSBP3Q9BWW4 388 aaPredicted RBP11.64□□□□□ -0.55
USP46-209ENST00000514536 BEX2Q9BXY8 128 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 SHARPINQ9H0F6 387 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 DNAJB11Q9UBS4 358 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 DHDHQ9UQ10 334 aa11.64□□□□□ -0.55
USP46-209ENST00000514536 NSD1Q96L73 2696 aaPredicted RBP11.63□□□□□ -0.55
USP46-209ENST00000514536 IGKV1-27A0A075B6S5 117 aa11.63□□□□□ -0.55
USP46-209ENST00000514536 KIAA1324LA8MWY0 1029 aaPredicted RBP11.63□□□□□ -0.55
USP46-209ENST00000514536 J3QT63 122 aa11.63□□□□□ -0.55
USP46-209ENST00000514536 GLRA1P23415 457 aa11.63□□□□□ -0.55
USP46-209ENST00000514536 SOX2P48431 317 aa11.63□□□□□ -0.55
USP46-209ENST00000514536 PITPNBP48739 271 aa11.63□□□□□ -0.55
USP46-209ENST00000514536 WNT4P56705 351 aa11.63□□□□□ -0.55
USP46-209ENST00000514536 GNB2P62879 340 aa11.63□□□□□ -0.55
USP46-209ENST00000514536 SLC35A2P78381 396 aa11.63□□□□□ -0.55
USP46-209ENST00000514536 CNN3Q15417 329 aaKnown RBP11.63□□□□□ -0.55
USP46-209ENST00000514536 CHRFAM7AQ494W8 412 aa11.63□□□□□ -0.55
USP46-209ENST00000514536 DMKNQ6E0U4 476 aaPredicted RBP11.63□□□□□ -0.55
USP46-209ENST00000514536 CALHM1Q8IU99 346 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms