RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 NDNFQ8TB73 568 aa4.88□□□□□ -1.63
RNF4-217ENST00000511892 PHYHIPQ92561 330 aa4.88□□□□□ -1.63
RNF4-217ENST00000511892 AP3S1Q92572 193 aa4.88□□□□□ -1.63
RNF4-217ENST00000511892 RPL3LQ92901 407 aaKnown RBP4.88□□□□□ -1.63
RNF4-217ENST00000511892 KCTD7Q96MP8 289 aa4.88□□□□□ -1.63
RNF4-217ENST00000511892 CNN2Q99439 309 aaKnown RBP4.88□□□□□ -1.63
RNF4-217ENST00000511892 CHCHD6Q9BRQ6 235 aa4.88□□□□□ -1.63
RNF4-217ENST00000511892 ZNF649Q9BS31 505 aa4.88□□□□□ -1.63
RNF4-217ENST00000511892 ALG8Q9BVK2 526 aa4.88□□□□□ -1.63
RNF4-217ENST00000511892 HCAR1Q9BXC0 346 aa4.88□□□□□ -1.63
RNF4-217ENST00000511892 OR51E2Q9H255 320 aa4.88□□□□□ -1.63
RNF4-217ENST00000511892 OR51V1Q9H2C8 321 aa4.88□□□□□ -1.63
RNF4-217ENST00000511892 C7orf69Q9H7B7 122 aa4.88□□□□□ -1.63
RNF4-217ENST00000511892 TMEM165Q9HC07 324 aa4.88□□□□□ -1.63
RNF4-217ENST00000511892 EXOSC4Q9NPD3 245 aaKnown RBP4.88□□□□□ -1.63
RNF4-217ENST00000511892 AKIP1Q9NQ31 210 aa4.88□□□□□ -1.63
RNF4-217ENST00000511892 DDX28Q9NUL7 540 aaKnown RBP4.88□□□□□ -1.63
RNF4-217ENST00000511892 TMEM100Q9NV29 134 aa4.88□□□□□ -1.63
RNF4-217ENST00000511892 KCNG2Q9UJ96 466 aa4.88□□□□□ -1.63
RNF4-217ENST00000511892 TMEM14AQ9Y6G1 99 aa4.88□□□□□ -1.63
RNF4-217ENST00000511892 A0A0A6YYJ9 748 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 ANKRD61A6NGH8 418 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 FAM183AA6NL82 134 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 CEACAM18A8MTB9 384 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 A8MXK9 166 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 LOC110117498-PIK3R3F6TDL0 507 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 M0R135 149 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 ZNF593O00488 134 aaPredicted RBP4.87□□□□□ -1.63
RNF4-217ENST00000511892 GPX5O75715 221 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 PTBP3O95758 552 aaKnown RBP4.87□□□□□ -1.63
RNF4-217ENST00000511892 SERPINA3P01011 423 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 SPARCP09486 303 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 WNT2P09544 360 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 GATA3P23771 443 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 MDH2P40926 338 aaKnown RBP4.87□□□□□ -1.63
RNF4-217ENST00000511892 CD200P41217 278 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 SRP9P49458 86 aaKnown RBP4.87□□□□□ -1.63
RNF4-217ENST00000511892 RORCP51449 518 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 GBX2P52951 348 aaPredicted RBP4.87□□□□□ -1.63
RNF4-217ENST00000511892 PPP5CP53041 499 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 TPTEP56180 551 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 HILS1P60008 231 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 LSM3P62310 102 aaKnown RBP4.87□□□□□ -1.63
RNF4-217ENST00000511892 HOXA4Q00056 320 aaPredicted RBP4.87□□□□□ -1.63
RNF4-217ENST00000511892 MALLQ13021 153 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 ZNF154Q13106 437 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 MPPED2Q15777 294 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 ZNF181Q2M3W8 571 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 CDONQ4KMG0 1287 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 CCDC58Q4VC31 144 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 KLF17Q5JT82 389 aaPredicted RBP4.87□□□□□ -1.63
RNF4-217ENST00000511892 TEX30Q5JUR7 227 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 FAM201AQ5SY85 155 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 GLYATL3Q5SZD4 288 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 OR2G6Q5TZ20 316 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 PRAMEF6Q5VXH4 476 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 LIPKQ5VXJ0 399 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 C16orf87Q6PH81 154 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 DRAM2Q6UX65 266 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 DCXRQ7Z4W1 244 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 LHFPL3Q86UP9 236 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 SPICQ8N5J4 248 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 CELF2-AS1Q8N7Q2 184 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 BBS1Q8NFJ9 593 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 OR10H4Q8NGA5 316 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 NANPQ8TBE9 248 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 ST7LQ8TDW4 575 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 SPRYD4Q8WW59 207 aaPredicted RBP4.87□□□□□ -1.63
RNF4-217ENST00000511892 GATAD2BQ8WXI9 593 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 THRSPQ92748 146 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 DVL3Q92997 716 aaPredicted RBP4.87□□□□□ -1.63
RNF4-217ENST00000511892 SPTSSAQ969W0 71 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 DACT3Q96B18 629 aaPredicted RBP4.87□□□□□ -1.63
RNF4-217ENST00000511892 OTULINQ96BN8 352 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 SLAMF6Q96DU3 332 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 ZNF799Q96GE5 643 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 WDFY2Q96P53 400 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 SLC6A7Q99884 636 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 TMEM246Q9BRR3 403 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 CENPOQ9BU64 300 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 MED20Q9H944 212 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 MARCH7Q9H992 704 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 ADGRL4Q9HBW9 690 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 ESM1Q9NQ30 184 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 TXNL4BQ9NX01 149 aaKnown RBP4.87□□□□□ -1.63
RNF4-217ENST00000511892 PCDHB10Q9UN67 800 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 SF3B6Q9Y3B4 125 aaKnown RBP4.87□□□□□ -1.63
RNF4-217ENST00000511892 INSIG2Q9Y5U4 225 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 VWFP04275 2813 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 MGAM2Q2M2H8 2515 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 DSCAML1Q8TD84 2053 aa4.87□□□□□ -1.63
RNF4-217ENST00000511892 CD300LBA8K4G0 201 aa4.86□□□□□ -1.63
RNF4-217ENST00000511892 IFNL4K9M1U5 179 aa4.86□□□□□ -1.63
RNF4-217ENST00000511892 OGG1O15527 345 aa4.86□□□□□ -1.63
RNF4-217ENST00000511892 GATBO75879 557 aaKnown RBP4.86□□□□□ -1.63
RNF4-217ENST00000511892 SULT1C4O75897 302 aa4.86□□□□□ -1.63
RNF4-217ENST00000511892 FSTL3O95633 263 aa4.86□□□□□ -1.63
RNF4-217ENST00000511892 SLC2A1P11166 492 aa4.86□□□□□ -1.63
RNF4-217ENST00000511892 CA6P23280 308 aa4.86□□□□□ -1.63
RNF4-217ENST00000511892 PTBP1P26599 531 aaKnown RBP eCLIP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms