RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 MND1Q9BWT6 205 aa6□□□□□ -1.45
PDLIM5-215ENST00000511586 TLNRD1Q9H1K6 362 aa6□□□□□ -1.45
PDLIM5-215ENST00000511586 PLEKHA1Q9HB21 404 aa6□□□□□ -1.45
PDLIM5-215ENST00000511586 PATZ1Q9HBE1 687 aaKnown RBP6□□□□□ -1.45
PDLIM5-215ENST00000511586 LPAR2Q9HBW0 351 aa6□□□□□ -1.45
PDLIM5-215ENST00000511586 TMEM160Q9NX00 188 aa6□□□□□ -1.45
PDLIM5-215ENST00000511586 MIOXQ9UGB7 285 aa6□□□□□ -1.45
PDLIM5-215ENST00000511586 DIMT1Q9UNQ2 313 aaKnown RBP6□□□□□ -1.45
PDLIM5-215ENST00000511586 CAB39Q9Y376 341 aaPredicted RBP6□□□□□ -1.45
PDLIM5-215ENST00000511586 EXOSC1Q9Y3B2 195 aaKnown RBP6□□□□□ -1.45
PDLIM5-215ENST00000511586 DYSFO75923 2080 aa6□□□□□ -1.45
PDLIM5-215ENST00000511586 ABCA1O95477 2261 aa6□□□□□ -1.45
PDLIM5-215ENST00000511586 TRAV38-1A0A0B4J264 116 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 TRAV20A0A0B4J274 112 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 TRBV2A0A0J9YWF9 115 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 LOC107986453A0A1B0GWG9 222 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 ANKRD61A6NGH8 418 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 A6NIN4 97 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 TMEM212A6NML5 194 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 OR4C45A6NMZ5 311 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 CEACAM18A8MTB9 384 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 E9PI62 339 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 F5H0A9 414 aaPredicted RBP5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 H3BMQ9 156 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 H3BSH0 61 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 LGALS8O00214 317 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 CDIPTO14735 213 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 NDUFA2O43678 99 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 PLPP2O43688 288 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 CRLF1O75462 422 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 FOXH1O75593 365 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 SERPINA3P01011 423 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 WNT2P09544 360 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 C21orf33P30042 268 aaPredicted RBP5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 TGM4P49221 684 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 GPM6AP51674 278 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 TMBIM6P55061 237 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 RIPPLY3P57055 190 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 MICBQ29980 383 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 ESCO2Q56NI9 601 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 DMRTC1Q5HYR2 192 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 UBE2UQ5VVX9 321 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 SFRP4Q6FHJ7 346 aaPredicted RBP5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 WDR82Q6UXN9 313 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 DCDC5Q6ZRR9 648 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 NLRC3Q7RTR2 1065 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 GCSAMQ8N6F7 178 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 SCCPDHQ8NBX0 429 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 C19orf18Q8NEA5 215 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 DEFB108BQ8NET1 73 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 OR5AK2Q8NH90 309 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 ZNF671Q8TAW3 534 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 LRRC29Q8WV35 223 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 PP6455Q8WZ26 134 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 RPL3LQ92901 407 aaKnown RBP5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 TMEM186Q96B77 213 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 C12orf43Q96C57 262 aaKnown RBP5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 NEIL1Q96FI4 390 aaPredicted RBP5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 TMEM246Q9BRR3 403 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 FUNDC2Q9BWH2 189 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 CDCA4Q9BXL8 241 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 FGF23Q9GZV9 251 aaPredicted RBP5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 COMMD4Q9H0A8 199 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 SHARPINQ9H0F6 387 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 OR51I2Q9H344 312 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 METTL17Q9H7H0 456 aaPredicted RBP5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 GPR173Q9NS66 373 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 HIF1ANQ9NWT6 349 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 LPAR3Q9UBY5 353 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 CDC42EP3Q9UKI2 254 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 HHLA2Q9UM44 414 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 SLC7A11Q9UPY5 501 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 ERGIC3Q9Y282 383 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 HIVEP2P31629 2446 aa5.99□□□□□ -1.45
PDLIM5-215ENST00000511586 TANC2Q9HCD6 1990 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 PQLC2LA1A4F0 135 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 OOEPA6NGQ2 149 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 VGLL3A8MV65 326 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 SRRM5B3KS81 715 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 C3orf80F5H4A9 247 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 GATBO75879 557 aaKnown RBP5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 ZFPL1O95159 310 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 GABARAPO95166 117 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 GYPAP02724 150 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 HSMCR30P0CW71 290 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 RPS2P15880 293 aaKnown RBP5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 MUC1P15941 1255 aaPredicted RBP5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 CD36P16671 472 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 ZNF20P17024 532 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 HOXB4P17483 251 aaPredicted RBP5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 HNF1AP20823 631 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 GATA3P23771 443 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 CD80P33681 288 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 GNB2P62879 340 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 LCN2P80188 198 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 HOXA4Q00056 320 aaPredicted RBP5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 IRF3Q14653 427 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 MED22Q15528 200 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 UBE2V2Q15819 145 aa5.98□□□□□ -1.45
PDLIM5-215ENST00000511586 CR1LQ2VPA4 569 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms