RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 KCNAB3O43448 404 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 ADAM20O43506 726 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 GATBO75879 557 aaKnown RBP10.93□□□□□ -0.66
TCOF1-209ENST00000506630 VENTXO95231 258 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 GATA3P23771 443 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 CPT2P23786 658 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 AQP4P55087 323 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 ALKBH1Q13686 389 aaKnown RBP10.93□□□□□ -0.66
TCOF1-209ENST00000506630 TMEM244Q5VVB8 128 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 TEX36Q5VZQ5 186 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 TMEM42Q69YG0 159 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 FDX2Q6P4F2 183 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 Q6ZSR3 168 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 FAM90A1Q86YD7 464 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 CCDC54Q8NEL0 328 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 OR10Z1Q8NGY1 313 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 TRMT10AQ8TBZ6 339 aaKnown RBP10.93□□□□□ -0.66
TCOF1-209ENST00000506630 NRG4Q8WWG1 115 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 GCDHQ92947 438 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-209ENST00000506630 TECTBQ96PL2 329 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 ZNF649Q9BS31 505 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 TMPRSS13Q9BYE2 586 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 OR51I2Q9H344 312 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 MMP26Q9NRE1 261 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 FRRS1LQ9P0K9 344 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 CLN8Q9UBY8 286 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 TRAPPC2LH3BP13 241 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 J3QLI3 93 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 AKR7A2O43488 359 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 NDUFA2O43678 99 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 RHBDL1O75783 438 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 LIMS3P0CW19 117 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 LIMS4P0CW20 117 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 ZNF20P17024 532 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 MYL12AP19105 171 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 GLRA1P23415 457 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 DCKP27707 260 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 HAAOP46952 286 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 COMPP49747 757 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-209ENST00000506630 GBX2P52951 348 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-209ENST00000506630 MRPL28Q13084 256 aaKnown RBP10.92□□□□□ -0.66
TCOF1-209ENST00000506630 MICBQ29980 383 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 FAM76BQ5HYJ3 339 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 HAGHLQ6PII5 290 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-209ENST00000506630 ZNF676Q8N7Q3 588 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 ZNF418Q8TF45 676 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-209ENST00000506630 NPRL2Q8WTW4 380 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 SEH1LQ96EE3 360 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 JAM3Q9BX67 310 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 CHST5Q9GZS9 411 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 C7orf69Q9H7B7 122 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 ERVK-18Q9QC07 812 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 CTSZQ9UBR2 303 aa10.92□□□□□ -0.66
TCOF1-209ENST00000506630 LOC105371242A0A075B767 164 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 PPIAL4CA0A0B4J2A2 164 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 FAM230AA0A1W2PPH8 454 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 TMPRSS2O15393 492 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 SERPINA3P01011 423 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 MUC1P15941 1255 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-209ENST00000506630 CFHR2P36980 270 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 NPY4RP50391 375 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 ETV1P50549 477 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 CCR9P51686 369 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 MED21Q13503 144 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 WDR25Q64LD2 544 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-209ENST00000506630 TMPRSS11AQ6ZMR5 421 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 ZNF573Q86YE8 665 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 OR51A4Q8NGJ6 313 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 OR13C3Q8NGS6 347 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 ZNF671Q8TAW3 534 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 AQP3Q92482 292 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 TFAP2CQ92754 450 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 C10orf35Q96D05 121 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 TMEM80Q96HE8 168 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 COMMD4Q9H0A8 199 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 WDR13Q9H1Z4 485 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 VCX3BQ9H321 246 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 SNTG1Q9NSN8 517 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 HHLA2Q9UM44 414 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 DIMT1Q9UNQ2 313 aaKnown RBP10.91□□□□□ -0.66
TCOF1-209ENST00000506630 SLC7A11Q9UPY5 501 aa10.91□□□□□ -0.66
TCOF1-209ENST00000506630 POLR3KQ9Y2Y1 108 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-209ENST00000506630 EXOSC1Q9Y3B2 195 aaKnown RBP10.91□□□□□ -0.66
TCOF1-209ENST00000506630 DSCAML1Q8TD84 2053 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 PQLC2LA1A4F0 135 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 EFCAB10A6NFE3 127 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 NKX6-3A6NJ46 265 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 TMEM212A6NML5 194 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 OR4C45A6NMZ5 311 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 E9PI62 339 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.9□□□□□ -0.66
TCOF1-209ENST00000506630 J3QT63 122 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 XPNPEP2O43895 674 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 AVPP01185 164 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 ISG15P05161 165 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 CCDC159P0C7I6 412 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 ADRA2CP18825 462 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 CNN3Q15417 329 aaKnown RBP10.9□□□□□ -0.66
TCOF1-209ENST00000506630 UBE2V2Q15819 145 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 OR2G6Q5TZ20 316 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms